Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 BHLHE23-202ENST00000612929 1109 ntBASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VIPAS39Q9H9C1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 AP006587.3-201ENST00000525742 1516 ntBASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
VIPAS39Q9H9C1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
VIPAS39Q9H9C1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
VIPAS39Q9H9C1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 AC092720.2-201ENST00000602388 1665 ntBASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.16■□□□□ 0.98
VIPAS39Q9H9C1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 MIR4508-201ENST00000584178 70 ntBASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 POLI-202ENST00000406285 2030 ntTSL 2 BASIC21.15■□□□□ 0.98
VIPAS39Q9H9C1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms