Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
VRTNQ9H8Y1 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VRTNQ9H8Y1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
VRTNQ9H8Y1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
VRTNQ9H8Y1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.08■■□□□ 1.13
VRTNQ9H8Y1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.08■■□□□ 1.13
VRTNQ9H8Y1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
VRTNQ9H8Y1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
VRTNQ9H8Y1 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.08■■□□□ 1.13
VRTNQ9H8Y1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
VRTNQ9H8Y1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 AF201337.1-201ENST00000520239 748 ntBASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
VRTNQ9H8Y1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 GUSBP6-202ENST00000438529 1198 ntBASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 AC083906.2-201ENST00000511578 360 ntBASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 PLK5-205ENST00000642079 1969 ntBASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
VRTNQ9H8Y1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 AC093787.1-201ENST00000450396 207 ntBASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 AC010980.2-201ENST00000587099 1412 ntBASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
VRTNQ9H8Y1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 AC027702.1-201ENST00000563810 1770 ntBASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 GPX1P1-201ENST00000388829 606 ntBASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 AC105036.2-201ENST00000569468 176 ntBASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.04■■□□□ 1.12
VRTNQ9H8Y1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 CYP21A1P-202ENST00000354927 1481 ntBASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 TSPY6P-201ENST00000448518 926 ntBASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms