Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 KRT17P1-201ENST00000399211 1546 ntBASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
OPN3Q9H1Y3 EP400NL-214ENST00000641289 2402 ntBASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 TMEM191A-211ENST00000637163 1067 ntBASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 MYC-209ENST00000641252 345 ntBASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
OPN3Q9H1Y3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 FAM201B-201ENST00000458407 597 ntBASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 CYP2T3P-201ENST00000601990 817 ntBASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
OPN3Q9H1Y3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 AC100791.3-201ENST00000617619 330 ntBASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
OPN3Q9H1Y3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 MCRIP2P1-201ENST00000394346 511 ntBASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.21■□□□□ 0.51
OPN3Q9H1Y3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms