Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 AC011484.1-201ENST00000377652 1995 ntBASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUCKS1Q9H1E3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
NUCKS1Q9H1E3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
NUCKS1Q9H1E3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 AC027702.1-201ENST00000563810 1770 ntBASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 AC020907.5-201ENST00000624372 1936 ntBASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 TPRG1LP1-201ENST00000598702 760 ntBASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.36■■□□□ 1.17
NUCKS1Q9H1E3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 CCDC92B-201ENST00000575506 885 ntBASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.35■■□□□ 1.17
NUCKS1Q9H1E3 BID-203ENST00000399765 1879 ntTSL 2 BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 POU5F1P4-201ENST00000413175 1085 ntBASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 DUX4L2-201ENST00000561772 1275 ntBASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 DUX4L6-201ENST00000626483 1275 ntBASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 DUX4L1-201ENST00000627662 1275 ntBASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 DUX4L8-201ENST00000629013 1275 ntBASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 DUX4L3-201ENST00000630187 1275 ntBASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 DUX4L7-201ENST00000630678 1275 ntBASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 DUX4L5-201ENST00000630834 1275 ntBASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 LINC02228-203ENST00000641970 1355 ntBASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
NUCKS1Q9H1E3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC22.33■■□□□ 1.17
NUCKS1Q9H1E3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms