Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB1BQ9H0U4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB1BQ9H0U4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RAB1BQ9H0U4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB1BQ9H0U4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB1BQ9H0U4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB1BQ9H0U4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 AL355472.2-201ENST00000422958 438 ntBASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB1BQ9H0U4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 KRT18P68-201ENST00000392293 1000 ntBASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 MIR4651-201ENST00000582622 73 ntBASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 AC083880.1-201ENST00000608266 535 ntBASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB1BQ9H0U4 AC079834.2-201ENST00000609776 1949 ntBASIC17.49■□□□□ 0.39
RAB1BQ9H0U4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB1BQ9H0U4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB1BQ9H0U4 POU5F1P3-201ENST00000428824 1078 ntBASIC17.49■□□□□ 0.39
RAB1BQ9H0U4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB1BQ9H0U4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB1BQ9H0U4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB1BQ9H0U4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB1BQ9H0U4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAB1BQ9H0U4 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 KRT17P1-201ENST00000399211 1546 ntBASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAB1BQ9H0U4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RAB1BQ9H0U4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.47■□□□□ 0.39
RAB1BQ9H0U4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB1BQ9H0U4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB1BQ9H0U4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.47■□□□□ 0.39
RAB1BQ9H0U4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RAB1BQ9H0U4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RAB1BQ9H0U4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms