Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX47Q9H0S4 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX47Q9H0S4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DDX47Q9H0S4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.52■■□□□ 1.03
DDX47Q9H0S4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.51■■□□□ 1.03
DDX47Q9H0S4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 IGHV3-19-201ENST00000521488 291 ntBASIC21.51■■□□□ 1.03
DDX47Q9H0S4 AC126544.1-201ENST00000580842 1059 ntBASIC21.51■■□□□ 1.03
DDX47Q9H0S4 AC233992.3-201ENST00000607491 485 ntBASIC21.51■■□□□ 1.03
DDX47Q9H0S4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX47Q9H0S4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DDX47Q9H0S4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.49■■□□□ 1.03
DDX47Q9H0S4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DDX47Q9H0S4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 AC011484.1-201ENST00000377652 1995 ntBASIC21.47■■□□□ 1.03
DDX47Q9H0S4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
DDX47Q9H0S4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 UNC93B3-201ENST00000308076 687 ntBASIC21.46■■□□□ 1.03
DDX47Q9H0S4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DDX47Q9H0S4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.03
DDX47Q9H0S4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.45■■□□□ 1.02
DDX47Q9H0S4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms