Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14□□□□□ -0.173e-6■■■■□ 25
XRN2Q9H0D6 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.213e-6■■■■□ 25
XRN2Q9H0D6 SLC37A3-222ENST00000490760 574 ntTSL 513.62□□□□□ -0.233e-6■■■■□ 25
XRN2Q9H0D6 SLC37A3-220ENST00000485861 534 ntTSL 313.59□□□□□ -0.233e-6■■■■□ 25
XRN2Q9H0D6 ASPSCR1-205ENST00000578236 3277 ntTSL 213.39□□□□□ -0.273e-8■■■■□ 25
XRN2Q9H0D6 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.283e-6■■■■□ 25
XRN2Q9H0D6 NFYB-201ENST00000240055 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.283e-6■■■■□ 25
XRN2Q9H0D6 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.323e-6■■■■□ 25
XRN2Q9H0D6 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.363e-6■■■■□ 25
XRN2Q9H0D6 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.82□□□□□ -0.369e-8■■■■□ 25
XRN2Q9H0D6 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.361e-6■■■■□ 25
XRN2Q9H0D6 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.386e-9■■■■□ 25
XRN2Q9H0D6 FBXO3-202ENST00000448981 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.43e-6■■■■□ 25
XRN2Q9H0D6 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.451e-6■■■■□ 25
XRN2Q9H0D6 SLC37A3-215ENST00000477571 3488 ntTSL 511.92□□□□□ -0.53e-6■■■■□ 25
XRN2Q9H0D6 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.523e-11■■■■□ 25
XRN2Q9H0D6 PPP1R12A-202ENST00000437004 4639 ntTSL 1 (best) BASIC11.43□□□□□ -0.583e-6■■■■□ 25
XRN2Q9H0D6 PPP1R12A-203ENST00000450142 5721 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.593e-6■■■■□ 25
XRN2Q9H0D6 ELOVL6-204ENST00000506461 575 ntTSL 411.21□□□□□ -0.616e-9■■■■□ 25
XRN2Q9H0D6 FBXO3-201ENST00000265651 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.633e-6■■■■□ 25
XRN2Q9H0D6 NFYB-203ENST00000550881 893 ntTSL 1 (best)10.85□□□□□ -0.673e-6■■■■□ 25
XRN2Q9H0D6 TMEM41B-202ENST00000524543 3848 ntTSL 210.84□□□□□ -0.673e-6■■■■□ 25
XRN2Q9H0D6 ELOVL6-205ENST00000506625 610 ntTSL 410.72□□□□□ -0.696e-9■■■■□ 25
XRN2Q9H0D6 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.731e-6■■■■□ 25
XRN2Q9H0D6 DYNC1H1-201ENST00000360184 14333 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.772e-7■■■■□ 25
XRN2Q9H0D6 ATP11A-205ENST00000419448 435 ntTSL 39.31□□□□□ -0.925e-7■■■■□ 25
XRN2Q9H0D6 PPP1R12A-213ENST00000550107 2925 ntTSL 1 (best) BASIC9.17□□□□□ -0.943e-6■■■■□ 25
XRN2Q9H0D6 FBXO3-207ENST00000530013 3740 ntTSL 1 (best)9.09□□□□□ -0.953e-6■■■■□ 25
XRN2Q9H0D6 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.043e-11■■■■□ 25
XRN2Q9H0D6 NFAT5-204ENST00000426654 14219 ntTSL 1 (best)7.82□□□□□ -1.163e-11■■■■□ 25
XRN2Q9H0D6 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.82□□□□□ -1.163e-6■■■■□ 25
XRN2Q9H0D6 CCNL1-218ENST00000476744 1029 ntTSL 27.74□□□□□ -1.173e-6■■■■□ 25
XRN2Q9H0D6 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.23e-11■■■■□ 25
XRN2Q9H0D6 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.323e-11■■■■□ 25
XRN2Q9H0D6 ELOVL6-203ENST00000503885 458 ntTSL 46.7□□□□□ -1.346e-9■■■■□ 25
XRN2Q9H0D6 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.43e-11■■■■□ 25
XRN2Q9H0D6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.466e-9■■■■□ 25
XRN2Q9H0D6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.91□□□□□ -1.463e-6■■■■□ 25
XRN2Q9H0D6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.74□□□□□ -1.493e-6■■■■□ 25
XRN2Q9H0D6 NFYB-204ENST00000551446 618 ntTSL 35.09□□□□□ -1.593e-6■■■■□ 25
XRN2Q9H0D6 CCNL1-215ENST00000474539 4799 ntTSL 1 (best)4.94□□□□□ -1.623e-6■■■■□ 25
XRN2Q9H0D6 AZIN1-208ENST00000521536 680 ntTSL 54.92□□□□□ -1.623e-6■■■■□ 25
XRN2Q9H0D6 AZIN1-209ENST00000522311 872 ntTSL 34.85□□□□□ -1.633e-6■■■■□ 25
XRN2Q9H0D6 CCNL1-211ENST00000468977 793 ntTSL 54.71□□□□□ -1.663e-6■■■■□ 25
XRN2Q9H0D6 CCNL1-206ENST00000464679 534 ntTSL 34.46□□□□□ -1.73e-6■■■■□ 25
XRN2Q9H0D6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.73e-11■■■■□ 25
XRN2Q9H0D6 SLC37A3-219ENST00000485734 578 ntTSL 44.28□□□□□ -1.723e-6■■■■□ 25
XRN2Q9H0D6 ELOVL6-208ENST00000514184 607 ntTSL 34.02□□□□□ -1.776e-9■■■■□ 25
XRN2Q9H0D6 PPP1R12A-216ENST00000550510 631 ntTSL 53.99□□□□□ -1.773e-6■■■■□ 25
XRN2Q9H0D6 CCNL1-204ENST00000464316 3843 ntTSL 1 (best)3.64□□□□□ -1.833e-6■■■■□ 25
XRN2Q9H0D6 CCNL1-214ENST00000471247 3671 ntTSL 1 (best)2.7□□□□□ -1.983e-6■■■■□ 25
XRN2Q9H0D6 SLC39A10-204ENST00000418005 563 ntTSL 427.21■■□□□ 1.952e-7■■■■□ 25
XRN2Q9H0D6 SLC39A10-208ENST00000464301 571 ntTSL 417.43■□□□□ 0.382e-7■■■■□ 25
XRN2Q9H0D6 SLC39A10-207ENST00000458054 593 ntTSL 411.27□□□□□ -0.612e-7■■■■□ 25
XRN2Q9H0D6 SLC39A10-203ENST00000412905 337 ntTSL 39.68□□□□□ -0.862e-7■■■■□ 25
XRN2Q9H0D6 SLC39A10-205ENST00000430412 4478 ntTSL 26.39□□□□□ -1.392e-7■■■■□ 25
XRN2Q9H0D6 SLC39A10-206ENST00000444421 544 ntTSL 45.12□□□□□ -1.592e-7■■■■□ 25
XRN2Q9H0D6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.812e-7■■■■□ 25
XRN2Q9H0D6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.852e-7■■■■□ 25
XRN2Q9H0D6 AC011481.3-201ENST00000623895 5594 ntBASIC13.53□□□□□ -0.242e-7■■■■□ 25
XRN2Q9H0D6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.81■■□□□ 1.242e-6■■■■□ 25
XRN2Q9H0D6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.67■■□□□ 1.221e-9■■■■□ 25
XRN2Q9H0D6 ZC3H3-202ENST00000528401 546 ntTSL 321.36■■□□□ 1.012e-8■■■■□ 25
XRN2Q9H0D6 KIF1C-204ENST00000574165 799 ntTSL 524.67■■□□□ 1.543e-8■■■■□ 25
XRN2Q9H0D6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.043e-8■■■■□ 25
XRN2Q9H0D6 USP22-204ENST00000476111 573 ntTSL 322.19■■□□□ 1.143e-6■■■■□ 24.9
XRN2Q9H0D6 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.35■■□□□ 1.011e-7■■■■□ 24.9
XRN2Q9H0D6 PUF60-217ENST00000531951 973 ntTSL 321.16■□□□□ 0.981e-7■■■■□ 24.9
XRN2Q9H0D6 USP22-209ENST00000579645 1906 ntTSL 521■□□□□ 0.953e-6■■■■□ 24.9
XRN2Q9H0D6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.821e-7■■■■□ 24.9
XRN2Q9H0D6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.781e-7■■■■□ 24.9
XRN2Q9H0D6 PUF60-207ENST00000526459 1003 ntTSL 218.15■□□□□ 0.51e-7■■■■□ 24.9
XRN2Q9H0D6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.261e-7■■■■□ 24.9
XRN2Q9H0D6 PUF60-211ENST00000527744 1007 ntTSL 216.23■□□□□ 0.191e-7■■■■□ 24.9
XRN2Q9H0D6 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.62■□□□□ 0.091e-7■■■■□ 24.9
XRN2Q9H0D6 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC15.15■□□□□ 0.021e-7■■■■□ 24.9
XRN2Q9H0D6 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.153e-6■■■■□ 24.9
XRN2Q9H0D6 USP22-211ENST00000584538 554 ntTSL 413.71□□□□□ -0.213e-6■■■■□ 24.9
XRN2Q9H0D6 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.293e-6■■■■□ 24.9
XRN2Q9H0D6 USP22-202ENST00000455117 677 ntTSL 512.28□□□□□ -0.443e-6■■■■□ 24.9
XRN2Q9H0D6 POGZ-219ENST00000533351 586 ntTSL 511.86□□□□□ -0.519e-7■■■■□ 24.9
XRN2Q9H0D6 POGZ-203ENST00000368863 6054 ntTSL 1 (best) BASIC9.57□□□□□ -0.889e-7■■■■□ 24.9
XRN2Q9H0D6 POGZ-210ENST00000476128 397 ntTSL 58.89□□□□□ -0.999e-7■■■■□ 24.9
XRN2Q9H0D6 POGZ-209ENST00000467287 649 ntTSL 48.57□□□□□ -1.049e-7■■■■□ 24.9
XRN2Q9H0D6 POGZ-201ENST00000271715 6626 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.069e-7■■■■□ 24.9
XRN2Q9H0D6 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.079e-7■■■■□ 24.9
XRN2Q9H0D6 POGZ-212ENST00000485040 2741 ntTSL 1 (best)8.19□□□□□ -1.19e-7■■■■□ 24.9
XRN2Q9H0D6 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.97□□□□□ -1.139e-7■■■■□ 24.9
XRN2Q9H0D6 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.17□□□□□ -1.429e-7■■■■□ 24.9
XRN2Q9H0D6 POGZ-202ENST00000358476 6459 ntTSL 25.97□□□□□ -1.459e-7■■■■□ 24.9
XRN2Q9H0D6 FASN-208ENST00000635733 100 ntTSL 59.99□□□□□ -0.811e-11■■■■□ 24.9
XRN2Q9H0D6 DPP9-223ENST00000601720 798 ntTSL 323.59■■□□□ 1.378e-8■■■■□ 24.9
XRN2Q9H0D6 DPP9-211ENST00000597900 728 ntTSL 317.08■□□□□ 0.328e-8■■■■□ 24.9
XRN2Q9H0D6 RAI1-203ENST00000471135 570 ntTSL 315.55■□□□□ 0.083e-6■■■■□ 24.9
XRN2Q9H0D6 RIPOR1-221ENST00000569253 1874 ntTSL 222.45■■□□□ 1.181e-6■■■■□ 24.9
XRN2Q9H0D6 RIPOR1-214ENST00000566559 2251 ntTSL 517.58■□□□□ 0.41e-6■■■■□ 24.9
XRN2Q9H0D6 MTA1-205ENST00000426567 568 ntTSL 317.23■□□□□ 0.353e-6■■■■□ 24.9
XRN2Q9H0D6 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC12.18□□□□□ -0.461e-6■■■■□ 24.8
XRN2Q9H0D6 SCAF4-206ENST00000485790 1282 ntTSL 216.64■□□□□ 0.254e-8■■■■□ 24.8
XRN2Q9H0D6 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.114e-8■■■■□ 24.8
Retrieved 100 of 21,068 protein–RNA pairs in 144.5 ms