Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.15■□□□□ 0.5
VRK1Q99986 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VRK1Q99986 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK1Q99986 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.15■□□□□ 0.5
VRK1Q99986 AC006970.2-201ENST00000450065 779 ntBASIC18.15■□□□□ 0.5
VRK1Q99986 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK1Q99986 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
VRK1Q99986 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.15■□□□□ 0.5
VRK1Q99986 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VRK1Q99986 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.15■□□□□ 0.5
VRK1Q99986 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VRK1Q99986 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.15■□□□□ 0.5
VRK1Q99986 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VRK1Q99986 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.14■□□□□ 0.5
VRK1Q99986 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.14■□□□□ 0.5
VRK1Q99986 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
VRK1Q99986 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VRK1Q99986 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.14■□□□□ 0.5
VRK1Q99986 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VRK1Q99986 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.14■□□□□ 0.49
VRK1Q99986 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VRK1Q99986 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VRK1Q99986 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.14■□□□□ 0.49
VRK1Q99986 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.14■□□□□ 0.49
VRK1Q99986 UBE2DNL-204ENST00000602536 740 ntBASIC18.14■□□□□ 0.49
VRK1Q99986 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.14■□□□□ 0.49
VRK1Q99986 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.14■□□□□ 0.49
VRK1Q99986 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.14■□□□□ 0.49
VRK1Q99986 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.14■□□□□ 0.49
VRK1Q99986 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VRK1Q99986 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VRK1Q99986 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.14■□□□□ 0.49
VRK1Q99986 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VRK1Q99986 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 AP006587.3-201ENST00000525742 1516 ntBASIC18.13■□□□□ 0.49
VRK1Q99986 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
VRK1Q99986 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
VRK1Q99986 HLA-L-209ENST00000420110 1011 ntBASIC18.13■□□□□ 0.49
VRK1Q99986 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.13■□□□□ 0.49
VRK1Q99986 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.13■□□□□ 0.49
VRK1Q99986 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.13■□□□□ 0.49
VRK1Q99986 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
VRK1Q99986 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VRK1Q99986 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
VRK1Q99986 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
VRK1Q99986 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
VRK1Q99986 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.12■□□□□ 0.49
VRK1Q99986 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.12■□□□□ 0.49
VRK1Q99986 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.12■□□□□ 0.49
VRK1Q99986 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.12■□□□□ 0.49
VRK1Q99986 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.12■□□□□ 0.49
VRK1Q99986 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.12■□□□□ 0.49
VRK1Q99986 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.12■□□□□ 0.49
VRK1Q99986 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.12■□□□□ 0.49
VRK1Q99986 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.12■□□□□ 0.49
VRK1Q99986 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
VRK1Q99986 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.12■□□□□ 0.49
VRK1Q99986 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
VRK1Q99986 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
VRK1Q99986 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
VRK1Q99986 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VRK1Q99986 AC007952.6-201ENST00000573168 2673 ntBASIC18.11■□□□□ 0.49
VRK1Q99986 AC003957.1-201ENST00000625108 2673 ntBASIC18.11■□□□□ 0.49
VRK1Q99986 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.11■□□□□ 0.49
VRK1Q99986 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
VRK1Q99986 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
VRK1Q99986 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.11■□□□□ 0.49
VRK1Q99986 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.11■□□□□ 0.49
VRK1Q99986 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
VRK1Q99986 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
VRK1Q99986 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
VRK1Q99986 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms