Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.73■■□□□ 1.07
CDCA3Q99618 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CDCA3Q99618 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA3Q99618 AC068473.5-201ENST00000616428 2072 ntBASIC21.73■■□□□ 1.07
CDCA3Q99618 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CDCA3Q99618 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CDCA3Q99618 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CDCA3Q99618 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA3Q99618 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA3Q99618 PGM5P4-201ENST00000421970 445 ntBASIC21.72■■□□□ 1.07
CDCA3Q99618 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA3Q99618 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.72■■□□□ 1.07
CDCA3Q99618 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDCA3Q99618 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA3Q99618 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.72■■□□□ 1.07
CDCA3Q99618 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA3Q99618 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.72■■□□□ 1.07
CDCA3Q99618 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.72■■□□□ 1.07
CDCA3Q99618 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA3Q99618 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA3Q99618 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDCA3Q99618 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.71■■□□□ 1.07
CDCA3Q99618 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA3Q99618 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA3Q99618 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA3Q99618 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.71■■□□□ 1.07
CDCA3Q99618 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.71■■□□□ 1.07
CDCA3Q99618 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA3Q99618 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA3Q99618 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
CDCA3Q99618 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA3Q99618 AC087633.2-202ENST00000565166 1439 ntBASIC21.71■■□□□ 1.07
CDCA3Q99618 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA3Q99618 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDCA3Q99618 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.7■■□□□ 1.07
CDCA3Q99618 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCA3Q99618 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA3Q99618 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA3Q99618 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCA3Q99618 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA3Q99618 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.7■■□□□ 1.06
CDCA3Q99618 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDCA3Q99618 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.7■■□□□ 1.06
CDCA3Q99618 RARRES2P10-201ENST00000564312 460 ntBASIC21.7■■□□□ 1.06
CDCA3Q99618 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CDCA3Q99618 AC133561.5-201ENST00000635547 218 ntBASIC21.7■■□□□ 1.06
CDCA3Q99618 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA3Q99618 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CDCA3Q99618 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDCA3Q99618 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CDCA3Q99618 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.7■■□□□ 1.06
CDCA3Q99618 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDCA3Q99618 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA3Q99618 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.69■■□□□ 1.06
CDCA3Q99618 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CDCA3Q99618 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA3Q99618 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA3Q99618 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDCA3Q99618 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CDCA3Q99618 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA3Q99618 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.69■■□□□ 1.06
CDCA3Q99618 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA3Q99618 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA3Q99618 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.69■■□□□ 1.06
CDCA3Q99618 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.69■■□□□ 1.06
CDCA3Q99618 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.69■■□□□ 1.06
CDCA3Q99618 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.69■■□□□ 1.06
CDCA3Q99618 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.69■■□□□ 1.06
CDCA3Q99618 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC21.69■■□□□ 1.06
CDCA3Q99618 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.69■■□□□ 1.06
CDCA3Q99618 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
CDCA3Q99618 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.69■■□□□ 1.06
CDCA3Q99618 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA3Q99618 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDCA3Q99618 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.68■■□□□ 1.06
CDCA3Q99618 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 AC087499.1-201ENST00000418141 1075 ntBASIC21.68■■□□□ 1.06
CDCA3Q99618 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
CDCA3Q99618 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.68■■□□□ 1.06
CDCA3Q99618 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 AC113410.3-201ENST00000623366 203 ntBASIC21.68■■□□□ 1.06
CDCA3Q99618 AC097493.4-201ENST00000641197 219 ntBASIC21.68■■□□□ 1.06
CDCA3Q99618 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDCA3Q99618 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.68■■□□□ 1.06
CDCA3Q99618 AC010542.4-201ENST00000563151 1910 ntBASIC21.68■■□□□ 1.06
CDCA3Q99618 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.68■■□□□ 1.06
CDCA3Q99618 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.68■■□□□ 1.06
CDCA3Q99618 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA3Q99618 AC026471.6-201ENST00000622954 1905 ntBASIC21.67■■□□□ 1.06
CDCA3Q99618 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDCA3Q99618 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.67■■□□□ 1.06
CDCA3Q99618 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
CDCA3Q99618 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms