Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
NECTIN4Q96NY8 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 AC133561.5-201ENST00000635547 218 ntBASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 AL023875.1-201ENST00000640777 796 ntBASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NECTIN4Q96NY8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 AC110285.5-201ENST00000611501 352 ntBASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
NECTIN4Q96NY8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.52■■□□□ 1.03
NECTIN4Q96NY8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
NECTIN4Q96NY8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
NECTIN4Q96NY8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NECTIN4Q96NY8 AC133561.1-201ENST00000568600 2415 ntBASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 AC087499.1-201ENST00000418141 1075 ntBASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 AC120498.8-201ENST00000614275 531 ntBASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
NECTIN4Q96NY8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.49■■□□□ 1.03
NECTIN4Q96NY8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms