Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CMTM3Q96MX0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMTM3Q96MX0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CMTM3Q96MX0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.77■□□□□ 0.43
CMTM3Q96MX0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
CMTM3Q96MX0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 AC098818.2-201ENST00000564925 2320 ntBASIC17.76■□□□□ 0.43
CMTM3Q96MX0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 AC099791.2-201ENST00000605725 427 ntBASIC17.76■□□□□ 0.43
CMTM3Q96MX0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 BX005040.4-201ENST00000637145 1518 ntBASIC17.76■□□□□ 0.43
CMTM3Q96MX0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CMTM3Q96MX0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.75■□□□□ 0.43
CMTM3Q96MX0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 AC010525.1-201ENST00000585559 441 ntBASIC17.75■□□□□ 0.43
CMTM3Q96MX0 MIR4787-201ENST00000607364 84 ntBASIC17.75■□□□□ 0.43
CMTM3Q96MX0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CMTM3Q96MX0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 MIR6724-1-201ENST00000616420 92 ntBASIC17.74■□□□□ 0.43
CMTM3Q96MX0 MIR6724-2-201ENST00000616483 92 ntBASIC17.74■□□□□ 0.43
CMTM3Q96MX0 MIR6724-4-201ENST00000617390 92 ntBASIC17.74■□□□□ 0.43
CMTM3Q96MX0 MIR6724-3-201ENST00000622482 92 ntBASIC17.74■□□□□ 0.43
CMTM3Q96MX0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CMTM3Q96MX0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 AC092171.4-201ENST00000609130 632 ntBASIC17.73■□□□□ 0.43
CMTM3Q96MX0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.73■□□□□ 0.43
CMTM3Q96MX0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.72■□□□□ 0.43
CMTM3Q96MX0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms