Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 RARRES2P4-201ENST00000514074 484 ntBASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 AL138781.1-201ENST00000566567 1274 ntBASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 AC142086.2-201ENST00000569753 217 ntBASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
PRICKLE1Q96MT3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
PRICKLE1Q96MT3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 AC098934.4-201ENST00000564127 592 ntBASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 AC008694.1-202ENST00000636953 945 ntBASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PRICKLE1Q96MT3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 SLC29A4P1-201ENST00000398760 971 ntBASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
PRICKLE1Q96MT3 MKRN4P-201ENST00000444706 1521 ntBASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 AL512625.2-201ENST00000417533 625 ntBASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 FAM21FP-204ENST00000608637 956 ntBASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PRICKLE1Q96MT3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRICKLE1Q96MT3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PRICKLE1Q96MT3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PRICKLE1Q96MT3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
PRICKLE1Q96MT3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.33■■□□□ 1.01
PRICKLE1Q96MT3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRICKLE1Q96MT3 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
PRICKLE1Q96MT3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRICKLE1Q96MT3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
PRICKLE1Q96MT3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.33■■□□□ 1
PRICKLE1Q96MT3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.33■■□□□ 1
PRICKLE1Q96MT3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PRICKLE1Q96MT3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 AC010980.2-201ENST00000587099 1412 ntBASIC21.32■■□□□ 1
PRICKLE1Q96MT3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 CDV3P1-201ENST00000471403 739 ntBASIC21.32■■□□□ 1
PRICKLE1Q96MT3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
PRICKLE1Q96MT3 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms