Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AL049796.1-201ENST00000565336 1766 ntBASIC21.82■■□□□ 1.08
SMARCD1Q96GM5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 FEM1AP4-201ENST00000443167 1987 ntBASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SMARCD1Q96GM5 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 AL138781.1-201ENST00000566567 1274 ntBASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SMARCD1Q96GM5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 MIPEPP3-201ENST00000412105 444 ntBASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SMARCD1Q96GM5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SMARCD1Q96GM5 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 MCRIP2P1-201ENST00000394346 511 ntBASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 BX276092.2-201ENST00000417668 665 ntBASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 MIR4758-201ENST00000577688 71 ntBASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SMARCD1Q96GM5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.77■■□□□ 1.07
SMARCD1Q96GM5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SMARCD1Q96GM5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SMARCD1Q96GM5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.07
SMARCD1Q96GM5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SMARCD1Q96GM5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms