Protein–RNA interactions for Protein: Q96BQ5

CCDC127, Coiled-coil domain-containing protein 127, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC127Q96BQ5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CCDC127Q96BQ5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 DUX4L16-201ENST00000555130 1264 ntBASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CCDC127Q96BQ5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 PLK5-205ENST00000642079 1969 ntBASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 AC091799.1-201ENST00000422823 811 ntBASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 AC080038.1-201ENST00000611274 1154 ntBASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.49■■□□□ 1.19
CCDC127Q96BQ5 AC121338.2-201ENST00000622535 1744 ntBASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
CCDC127Q96BQ5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 AC013268.1-206ENST00000638368 961 ntBASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 AC112229.1-201ENST00000639295 961 ntBASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCDC127Q96BQ5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 CNN2P6-201ENST00000439038 900 ntBASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
CCDC127Q96BQ5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
CCDC127Q96BQ5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.45■■□□□ 1.18
CCDC127Q96BQ5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.44■■□□□ 1.18
CCDC127Q96BQ5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CCDC127Q96BQ5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms