Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP9XQ93008 AC005521.1-201ENST00000393351 872 ntBASIC18.23■□□□□ 0.51
USP9XQ93008 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.23■□□□□ 0.51
USP9XQ93008 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP9XQ93008 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP9XQ93008 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP9XQ93008 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP9XQ93008 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP9XQ93008 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP9XQ93008 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
USP9XQ93008 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
USP9XQ93008 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
USP9XQ93008 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP9XQ93008 ANOS2P-203ENST00000472227 1816 ntBASIC18.22■□□□□ 0.51
USP9XQ93008 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP9XQ93008 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
USP9XQ93008 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
USP9XQ93008 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP9XQ93008 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.22■□□□□ 0.51
USP9XQ93008 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.22■□□□□ 0.51
USP9XQ93008 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
USP9XQ93008 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
USP9XQ93008 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.22■□□□□ 0.51
USP9XQ93008 KRASP1-201ENST00000407852 552 ntBASIC18.22■□□□□ 0.51
USP9XQ93008 AC091799.1-201ENST00000422823 811 ntBASIC18.22■□□□□ 0.51
USP9XQ93008 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.22■□□□□ 0.51
USP9XQ93008 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.22■□□□□ 0.51
USP9XQ93008 AF186192.3-201ENST00000583427 947 ntBASIC18.22■□□□□ 0.51
USP9XQ93008 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.22■□□□□ 0.51
USP9XQ93008 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.22■□□□□ 0.51
USP9XQ93008 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
USP9XQ93008 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP9XQ93008 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
USP9XQ93008 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP9XQ93008 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.21■□□□□ 0.51
USP9XQ93008 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
USP9XQ93008 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.21■□□□□ 0.51
USP9XQ93008 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
USP9XQ93008 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
USP9XQ93008 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.21■□□□□ 0.51
USP9XQ93008 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP9XQ93008 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
USP9XQ93008 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
USP9XQ93008 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
USP9XQ93008 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.2■□□□□ 0.5
USP9XQ93008 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.2■□□□□ 0.5
USP9XQ93008 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 AC110285.5-201ENST00000611501 352 ntBASIC18.2■□□□□ 0.5
USP9XQ93008 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.2■□□□□ 0.5
USP9XQ93008 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
USP9XQ93008 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.2■□□□□ 0.5
USP9XQ93008 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.2■□□□□ 0.5
USP9XQ93008 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.2■□□□□ 0.5
USP9XQ93008 AC003102.1-202ENST00000563394 1796 ntBASIC18.2■□□□□ 0.5
USP9XQ93008 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.2■□□□□ 0.5
USP9XQ93008 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP9XQ93008 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP9XQ93008 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
USP9XQ93008 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP9XQ93008 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP9XQ93008 DUSP5P1-201ENST00000441325 1139 ntBASIC18.19■□□□□ 0.5
USP9XQ93008 RBM17P1-201ENST00000453646 1190 ntBASIC18.19■□□□□ 0.5
USP9XQ93008 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
USP9XQ93008 AC005363.2-201ENST00000618631 242 ntBASIC18.19■□□□□ 0.5
USP9XQ93008 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.19■□□□□ 0.5
USP9XQ93008 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP9XQ93008 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.19■□□□□ 0.5
USP9XQ93008 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.19■□□□□ 0.5
USP9XQ93008 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP9XQ93008 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
USP9XQ93008 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.19■□□□□ 0.5
USP9XQ93008 AC105020.6-201ENST00000621523 1217 ntBASIC18.19■□□□□ 0.5
USP9XQ93008 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.19■□□□□ 0.5
USP9XQ93008 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
USP9XQ93008 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.19■□□□□ 0.5
USP9XQ93008 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.19■□□□□ 0.5
USP9XQ93008 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
USP9XQ93008 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP9XQ93008 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.18■□□□□ 0.5
USP9XQ93008 MMP23A-201ENST00000234610 1017 ntBASIC18.18■□□□□ 0.5
USP9XQ93008 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP9XQ93008 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP9XQ93008 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP9XQ93008 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP9XQ93008 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.18■□□□□ 0.5
USP9XQ93008 CDV3P1-201ENST00000471403 739 ntBASIC18.18■□□□□ 0.5
USP9XQ93008 AC087633.2-202ENST00000565166 1439 ntBASIC18.18■□□□□ 0.5
USP9XQ93008 AC092068.2-201ENST00000590491 1708 ntBASIC18.18■□□□□ 0.5
USP9XQ93008 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.18■□□□□ 0.5
USP9XQ93008 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.18■□□□□ 0.5
USP9XQ93008 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms