Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHF3Q92576 AC061975.6-201ENST00000579045 1553 ntBASIC18.69■□□□□ 0.58
PHF3Q92576 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHF3Q92576 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.68■□□□□ 0.58
PHF3Q92576 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHF3Q92576 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.68■□□□□ 0.58
PHF3Q92576 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.68■□□□□ 0.58
PHF3Q92576 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.68■□□□□ 0.58
PHF3Q92576 AC091874.3-201ENST00000512672 1195 ntBASIC18.68■□□□□ 0.58
PHF3Q92576 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.68■□□□□ 0.58
PHF3Q92576 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHF3Q92576 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.68■□□□□ 0.58
PHF3Q92576 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHF3Q92576 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHF3Q92576 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHF3Q92576 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHF3Q92576 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PHF3Q92576 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.67■□□□□ 0.58
PHF3Q92576 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.67■□□□□ 0.58
PHF3Q92576 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
PHF3Q92576 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.67■□□□□ 0.58
PHF3Q92576 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.67■□□□□ 0.58
PHF3Q92576 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PHF3Q92576 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
PHF3Q92576 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.67■□□□□ 0.58
PHF3Q92576 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 FAM201B-201ENST00000458407 597 ntBASIC18.67■□□□□ 0.58
PHF3Q92576 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.67■□□□□ 0.58
PHF3Q92576 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.67■□□□□ 0.58
PHF3Q92576 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.67■□□□□ 0.58
PHF3Q92576 AC008687.6-201ENST00000596318 630 ntBASIC18.67■□□□□ 0.58
PHF3Q92576 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHF3Q92576 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.66■□□□□ 0.58
PHF3Q92576 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
PHF3Q92576 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
PHF3Q92576 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.66■□□□□ 0.58
PHF3Q92576 AC092118.2-201ENST00000613495 667 ntBASIC18.66■□□□□ 0.58
PHF3Q92576 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PHF3Q92576 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.66■□□□□ 0.58
PHF3Q92576 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.66■□□□□ 0.58
PHF3Q92576 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.66■□□□□ 0.58
PHF3Q92576 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.66■□□□□ 0.58
PHF3Q92576 MIPEPP3-201ENST00000412105 444 ntBASIC18.66■□□□□ 0.58
PHF3Q92576 AC093787.1-201ENST00000450396 207 ntBASIC18.66■□□□□ 0.58
PHF3Q92576 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.66■□□□□ 0.58
PHF3Q92576 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHF3Q92576 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.65■□□□□ 0.58
PHF3Q92576 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHF3Q92576 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PHF3Q92576 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.65■□□□□ 0.58
PHF3Q92576 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHF3Q92576 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PHF3Q92576 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.65■□□□□ 0.58
PHF3Q92576 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.65■□□□□ 0.58
PHF3Q92576 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.65■□□□□ 0.58
PHF3Q92576 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHF3Q92576 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.65■□□□□ 0.58
PHF3Q92576 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PHF3Q92576 AC005229.4-201ENST00000610085 2198 ntBASIC18.65■□□□□ 0.58
PHF3Q92576 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHF3Q92576 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PHF3Q92576 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHF3Q92576 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHF3Q92576 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHF3Q92576 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHF3Q92576 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHF3Q92576 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PHF3Q92576 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PHF3Q92576 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.64■□□□□ 0.58
PHF3Q92576 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PHF3Q92576 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
PHF3Q92576 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PHF3Q92576 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHF3Q92576 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHF3Q92576 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.64■□□□□ 0.57
PHF3Q92576 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.64■□□□□ 0.57
PHF3Q92576 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHF3Q92576 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PHF3Q92576 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.64■□□□□ 0.57
PHF3Q92576 UNC93B5-201ENST00000530315 699 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms