Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 AL512625.2-201ENST00000417533 625 ntBASIC19.47■□□□□ 0.71
TM9SF4Q92544 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TM9SF4Q92544 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM9SF4Q92544 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.46■□□□□ 0.71
TM9SF4Q92544 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TM9SF4Q92544 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM9SF4Q92544 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TM9SF4Q92544 AC244015.2-201ENST00000616358 1861 ntBASIC19.45■□□□□ 0.7
TM9SF4Q92544 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF4Q92544 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.45■□□□□ 0.7
TM9SF4Q92544 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.45■□□□□ 0.7
TM9SF4Q92544 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.45■□□□□ 0.7
TM9SF4Q92544 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
TM9SF4Q92544 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.45■□□□□ 0.7
TM9SF4Q92544 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF4Q92544 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF4Q92544 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF4Q92544 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF4Q92544 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF4Q92544 MIPEPP3-201ENST00000412105 444 ntBASIC19.45■□□□□ 0.7
TM9SF4Q92544 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.45■□□□□ 0.7
TM9SF4Q92544 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF4Q92544 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF4Q92544 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.45■□□□□ 0.7
TM9SF4Q92544 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TM9SF4Q92544 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
TM9SF4Q92544 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TM9SF4Q92544 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
TM9SF4Q92544 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.44■□□□□ 0.7
TM9SF4Q92544 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TM9SF4Q92544 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.44■□□□□ 0.7
TM9SF4Q92544 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.44■□□□□ 0.7
TM9SF4Q92544 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.44■□□□□ 0.7
TM9SF4Q92544 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.44■□□□□ 0.7
TM9SF4Q92544 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TM9SF4Q92544 KRT16P2-201ENST00000414673 1423 ntBASIC19.43■□□□□ 0.7
TM9SF4Q92544 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.43■□□□□ 0.7
TM9SF4Q92544 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF4Q92544 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF4Q92544 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF4Q92544 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF4Q92544 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF4Q92544 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF4Q92544 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TM9SF4Q92544 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.43■□□□□ 0.7
TM9SF4Q92544 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.43■□□□□ 0.7
TM9SF4Q92544 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.43■□□□□ 0.7
TM9SF4Q92544 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.43■□□□□ 0.7
TM9SF4Q92544 AC092118.2-201ENST00000613495 667 ntBASIC19.43■□□□□ 0.7
TM9SF4Q92544 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.43■□□□□ 0.7
TM9SF4Q92544 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF4Q92544 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TM9SF4Q92544 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.43■□□□□ 0.7
TM9SF4Q92544 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.43■□□□□ 0.7
TM9SF4Q92544 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
TM9SF4Q92544 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TM9SF4Q92544 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms