Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.61■□□□□ 0.57
FNDC9Q8TBE3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 AF201337.1-201ENST00000520239 748 ntBASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 AC105036.2-201ENST00000569468 176 ntBASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 AC133552.2-202ENST00000575694 574 ntBASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 AL591742.1-201ENST00000604433 565 ntBASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 AC244015.2-201ENST00000616358 1861 ntBASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.6■□□□□ 0.57
FNDC9Q8TBE3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 AL355802.2-201ENST00000402069 882 ntBASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 TSPY6P-201ENST00000448518 926 ntBASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 AC008694.1-202ENST00000636953 945 ntBASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
FNDC9Q8TBE3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
FNDC9Q8TBE3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
FNDC9Q8TBE3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
FNDC9Q8TBE3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FNDC9Q8TBE3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
FNDC9Q8TBE3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 AC069236.1-201ENST00000604339 616 ntBASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FNDC9Q8TBE3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 AC091799.1-201ENST00000422823 811 ntBASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 GUSBP6-202ENST00000438529 1198 ntBASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 AC016405.3-201ENST00000607710 860 ntBASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FNDC9Q8TBE3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FNDC9Q8TBE3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FNDC9Q8TBE3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FNDC9Q8TBE3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms