Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 AC008175.2-201ENST00000612840 297 ntBASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ZNF439Q8NDP4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.06■□□□□ 0.32
ZNF439Q8NDP4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 AC104187.1-201ENST00000607510 612 ntBASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.05■□□□□ 0.32
ZNF439Q8NDP4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.04■□□□□ 0.32
ZNF439Q8NDP4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ZNF439Q8NDP4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms