Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 AC121338.2-201ENST00000622535 1744 ntBASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 AC011767.1-201ENST00000617410 1153 ntBASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 BID-214ENST00000617586 542 ntTSL 5 BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 AC092437.1-201ENST00000624794 1048 ntBASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNRF1Q8ND25 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 AC243732.1-201ENST00000612648 864 ntBASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNRF1Q8ND25 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.27■□□□□ 0.35
ZNRF1Q8ND25 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.27■□□□□ 0.35
ZNRF1Q8ND25 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.27■□□□□ 0.35
ZNRF1Q8ND25 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNRF1Q8ND25 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZNRF1Q8ND25 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
ZNRF1Q8ND25 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 AC004911.1-201ENST00000416316 871 ntBASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 TERF1P5-201ENST00000477545 1207 ntBASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ZNRF1Q8ND25 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 AC091799.1-201ENST00000422823 811 ntBASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 AL137784.2-201ENST00000607332 1000 ntBASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
ZNRF1Q8ND25 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
ZNRF1Q8ND25 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.24■□□□□ 0.35
ZNRF1Q8ND25 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ZNRF1Q8ND25 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ZNRF1Q8ND25 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms