Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 FEM1AP1-201ENST00000431297 1995 ntBASIC20.67■□□□□ 0.9
LSMEM2Q8N112 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 AC104187.1-201ENST00000607510 612 ntBASIC20.67■□□□□ 0.9
LSMEM2Q8N112 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 AL050303.2-201ENST00000619798 666 ntBASIC20.67■□□□□ 0.9
LSMEM2Q8N112 AC133041.1-202ENST00000642053 222 ntBASIC20.67■□□□□ 0.9
LSMEM2Q8N112 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LSMEM2Q8N112 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 DUX4L16-201ENST00000555130 1264 ntBASIC20.66■□□□□ 0.9
LSMEM2Q8N112 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.66■□□□□ 0.9
LSMEM2Q8N112 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LSMEM2Q8N112 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LSMEM2Q8N112 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.64■□□□□ 0.9
LSMEM2Q8N112 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.64■□□□□ 0.9
LSMEM2Q8N112 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.64■□□□□ 0.9
LSMEM2Q8N112 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LSMEM2Q8N112 AC005224.4-201ENST00000583262 1652 ntBASIC20.64■□□□□ 0.9
LSMEM2Q8N112 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LSMEM2Q8N112 AP006587.3-201ENST00000525742 1516 ntBASIC20.64■□□□□ 0.9
LSMEM2Q8N112 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LSMEM2Q8N112 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 AC073210.2-201ENST00000430369 194 ntBASIC20.64■□□□□ 0.89
LSMEM2Q8N112 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LSMEM2Q8N112 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 GUSBP6-202ENST00000438529 1198 ntBASIC20.63■□□□□ 0.89
LSMEM2Q8N112 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LSMEM2Q8N112 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSMEM2Q8N112 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.62■□□□□ 0.89
LSMEM2Q8N112 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LSMEM2Q8N112 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LSMEM2Q8N112 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms