Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CD99P1-205ENST00000527459 561 ntBASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 KRT18P6-201ENST00000555540 1265 ntBASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCN4BQ8IWT1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 AC092118.2-201ENST00000613495 667 ntBASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 Z98882.1-201ENST00000622160 2253 ntBASIC21.83■■□□□ 1.09
SCN4BQ8IWT1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SCN4BQ8IWT1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SCN4BQ8IWT1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SCN4BQ8IWT1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 AC116050.2-201ENST00000612102 1779 ntBASIC21.82■■□□□ 1.08
SCN4BQ8IWT1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 LSM12P1-201ENST00000411836 588 ntBASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SCN4BQ8IWT1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.8■■□□□ 1.08
SCN4BQ8IWT1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 KRT17P1-201ENST00000399211 1546 ntBASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SCN4BQ8IWT1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SCN4BQ8IWT1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms