Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SNX5-217ENST00000606557 1087 ntBASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 AC129492.7-201ENST00000622992 756 ntBASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.72■□□□□ 0.59
CROCCP3Q8IVE0 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 AC027702.1-201ENST00000563810 1770 ntBASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CROCCP3Q8IVE0 AC120498.9-201ENST00000339021 3867 ntBASIC18.71■□□□□ 0.58
CROCCP3Q8IVE0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
CROCCP3Q8IVE0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
CROCCP3Q8IVE0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CROCCP3Q8IVE0 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 C17orf82-201ENST00000623772 1530 ntBASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 AL162377.1-201ENST00000618844 1793 ntBASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 AC005703.6-201ENST00000623265 1329 ntBASIC18.69■□□□□ 0.58
CROCCP3Q8IVE0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 AC005332.8-201ENST00000622750 2735 ntBASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CROCCP3Q8IVE0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 MIR4449-201ENST00000578365 66 ntBASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.67■□□□□ 0.58
CROCCP3Q8IVE0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms