Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 RAP2CP1-201ENST00000605103 478 ntBASIC19.34■□□□□ 0.69
CCDC71Q8IV32 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC71Q8IV32 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC71Q8IV32 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC71Q8IV32 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCDC71Q8IV32 GABARAPL3-202ENST00000624044 1851 ntBASIC19.33■□□□□ 0.69
CCDC71Q8IV32 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC71Q8IV32 RNF165-205ENST00000588679 2904 ntBASIC19.33■□□□□ 0.69
CCDC71Q8IV32 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.33■□□□□ 0.69
CCDC71Q8IV32 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 BID-214ENST00000617586 542 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 AL391422.3-201ENST00000603791 2761 ntBASIC19.33■□□□□ 0.68
CCDC71Q8IV32 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC71Q8IV32 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 KRT19P1-201ENST00000405746 1186 ntBASIC19.32■□□□□ 0.68
CCDC71Q8IV32 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC71Q8IV32 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.32■□□□□ 0.68
CCDC71Q8IV32 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC71Q8IV32 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 AC026185.1-201ENST00000445748 174 ntBASIC19.3■□□□□ 0.68
CCDC71Q8IV32 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC71Q8IV32 AFG3L1P-217ENST00000557444 2447 ntBASIC19.3■□□□□ 0.68
CCDC71Q8IV32 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms