Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 AC126544.1-201ENST00000580842 1059 ntBASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.58■□□□□ 0.89
CRLF3Q8IUI8 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CRLF3Q8IUI8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CRLF3Q8IUI8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
CRLF3Q8IUI8 AC121338.2-201ENST00000622535 1744 ntBASIC20.58■□□□□ 0.88
CRLF3Q8IUI8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.58■□□□□ 0.88
CRLF3Q8IUI8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 AC027702.1-201ENST00000563810 1770 ntBASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 AC010525.1-201ENST00000585559 441 ntBASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 AFG3L1P-217ENST00000557444 2447 ntBASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 AP006587.3-201ENST00000525742 1516 ntBASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRLF3Q8IUI8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 IRS3P-201ENST00000223076 1006 ntBASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRLF3Q8IUI8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 AC026271.2-201ENST00000428091 497 ntBASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 AC020907.5-201ENST00000624372 1936 ntBASIC20.55■□□□□ 0.88
CRLF3Q8IUI8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
CRLF3Q8IUI8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 AC007225.1-201ENST00000566331 1836 ntBASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.53■□□□□ 0.88
CRLF3Q8IUI8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms