Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 OR7E47P-201ENST00000546390 1422 ntBASIC21.93■■□□□ 1.1
RNF135Q8IUD6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 LINC00565-201ENST00000562710 2331 ntBASIC21.93■■□□□ 1.1
RNF135Q8IUD6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
RNF135Q8IUD6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 AC127496.7-201ENST00000625110 1798 ntBASIC21.92■■□□□ 1.1
RNF135Q8IUD6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RNF135Q8IUD6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 BX088651.1-201ENST00000540551 451 ntBASIC21.91■■□□□ 1.1
RNF135Q8IUD6 AC060766.5-201ENST00000590539 871 ntBASIC21.91■■□□□ 1.1
RNF135Q8IUD6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RNF135Q8IUD6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 RN7SL471P-201ENST00000580476 299 ntBASIC21.9■■□□□ 1.1
RNF135Q8IUD6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF135Q8IUD6 ECEL1P1-201ENST00000373592 1742 ntBASIC21.89■■□□□ 1.1
RNF135Q8IUD6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 KRT17P3-201ENST00000420566 1262 ntBASIC21.89■■□□□ 1.09
RNF135Q8IUD6 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.89■■□□□ 1.09
RNF135Q8IUD6 AC008175.2-201ENST00000612840 297 ntBASIC21.89■■□□□ 1.09
RNF135Q8IUD6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF135Q8IUD6 RBM17P2-201ENST00000616397 1405 ntBASIC21.89■■□□□ 1.09
RNF135Q8IUD6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 HLA-B-256ENST00000639848 1089 ntBASIC21.88■■□□□ 1.09
RNF135Q8IUD6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF135Q8IUD6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms