Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 AC092053.2-201ENST00000640557 1818 ntBASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 C11orf96-202ENST00000528572 1834 ntBASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
VPS13BQ7Z7G8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 KRT17P3-201ENST00000420566 1262 ntBASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 MIR6786-201ENST00000616843 113 ntBASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
VPS13BQ7Z7G8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 POM121L13P-201ENST00000422362 380 ntBASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AC092368.3-202ENST00000574180 1591 ntBASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 FAM21FP-204ENST00000608637 956 ntBASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC12.85□□□□□ -0.35
VPS13BQ7Z7G8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 374.3 ms