Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 AC008175.2-201ENST00000612840 297 ntBASIC17.62■□□□□ 0.41
CSMD2Q7Z408 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 C11orf96-202ENST00000528572 1834 ntBASIC17.62■□□□□ 0.41
CSMD2Q7Z408 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CSMD2Q7Z408 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.61■□□□□ 0.41
CSMD2Q7Z408 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.6■□□□□ 0.41
CSMD2Q7Z408 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 AL034346.1-201ENST00000568244 1277 ntBASIC17.6■□□□□ 0.41
CSMD2Q7Z408 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CSMD2Q7Z408 AC092053.2-201ENST00000640557 1818 ntBASIC17.59■□□□□ 0.41
CSMD2Q7Z408 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 AC087742.1-201ENST00000575880 1738 ntBASIC17.59■□□□□ 0.41
CSMD2Q7Z408 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 CYP2D8P-201ENST00000433633 1490 ntBASIC17.59■□□□□ 0.41
CSMD2Q7Z408 FAM21FP-204ENST00000608637 956 ntBASIC17.59■□□□□ 0.41
CSMD2Q7Z408 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSMD2Q7Z408 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD2Q7Z408 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CSMD2Q7Z408 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.58■□□□□ 0.41
CSMD2Q7Z408 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.58■□□□□ 0.41
CSMD2Q7Z408 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.58■□□□□ 0.41
CSMD2Q7Z408 REXO1L10P-201ENST00000615707 1290 ntBASIC17.58■□□□□ 0.41
CSMD2Q7Z408 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD2Q7Z408 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSMD2Q7Z408 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CSMD2Q7Z408 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.58■□□□□ 0.4
CSMD2Q7Z408 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSMD2Q7Z408 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CSMD2Q7Z408 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.58■□□□□ 0.4
CSMD2Q7Z408 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSMD2Q7Z408 MCRIP2P1-201ENST00000394346 511 ntBASIC17.57■□□□□ 0.4
CSMD2Q7Z408 UPK3BP1-201ENST00000428678 509 ntBASIC17.57■□□□□ 0.4
CSMD2Q7Z408 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSMD2Q7Z408 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms