Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SHFQ7M4L6 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
SHFQ7M4L6 AC020907.5-201ENST00000624372 1936 ntBASIC18.64■□□□□ 0.58
SHFQ7M4L6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SHFQ7M4L6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.64■□□□□ 0.57
SHFQ7M4L6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
SHFQ7M4L6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.64■□□□□ 0.57
SHFQ7M4L6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.64■□□□□ 0.57
SHFQ7M4L6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SHFQ7M4L6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SHFQ7M4L6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SHFQ7M4L6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.63■□□□□ 0.57
SHFQ7M4L6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SHFQ7M4L6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHFQ7M4L6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SHFQ7M4L6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SHFQ7M4L6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHFQ7M4L6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.63■□□□□ 0.57
SHFQ7M4L6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHFQ7M4L6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SHFQ7M4L6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHFQ7M4L6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SHFQ7M4L6 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.63■□□□□ 0.57
SHFQ7M4L6 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SHFQ7M4L6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 AC131212.1-201ENST00000613771 668 ntBASIC18.62■□□□□ 0.57
SHFQ7M4L6 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.62■□□□□ 0.57
SHFQ7M4L6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SHFQ7M4L6 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 FP700111.2-201ENST00000619190 1892 ntBASIC18.61■□□□□ 0.57
SHFQ7M4L6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SHFQ7M4L6 AL512408.1-201ENST00000569378 2000 ntBASIC18.61■□□□□ 0.57
SHFQ7M4L6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SHFQ7M4L6 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SHFQ7M4L6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SHFQ7M4L6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms