Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FOXR1Q6PIV2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 AL358852.1-201ENST00000623174 1268 ntBASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FOXR1Q6PIV2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 AC112907.3-201ENST00000577781 2400 ntBASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FOXR1Q6PIV2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 IGHV3-19-201ENST00000521488 291 ntBASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 LINC01960-201ENST00000563759 1884 ntBASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
FOXR1Q6PIV2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXR1Q6PIV2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 AC012414.1-201ENST00000556676 535 ntBASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXR1Q6PIV2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.4■■□□□ 1.02
FOXR1Q6PIV2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms