Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.9■□□□□ 0.46
C11orf88Q6PI97 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
C11orf88Q6PI97 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
C11orf88Q6PI97 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
C11orf88Q6PI97 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 MIR939-201ENST00000401314 82 ntBASIC17.89■□□□□ 0.45
C11orf88Q6PI97 AC027682.1-201ENST00000562846 899 ntBASIC17.89■□□□□ 0.45
C11orf88Q6PI97 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
C11orf88Q6PI97 OXCT2P1-201ENST00000447263 1535 ntBASIC17.88■□□□□ 0.45
C11orf88Q6PI97 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 AF213884.3-201ENST00000563833 479 ntBASIC17.88■□□□□ 0.45
C11orf88Q6PI97 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 AL136967.2-201ENST00000623968 743 ntBASIC17.88■□□□□ 0.45
C11orf88Q6PI97 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.88■□□□□ 0.45
C11orf88Q6PI97 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 ZNRF2P3-201ENST00000424200 374 ntBASIC17.87■□□□□ 0.45
C11orf88Q6PI97 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 AP001330.3-201ENST00000520123 633 ntBASIC17.87■□□□□ 0.45
C11orf88Q6PI97 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 RASA4CP-201ENST00000424092 1398 ntBASIC17.87■□□□□ 0.45
C11orf88Q6PI97 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 AC087289.5-201ENST00000586076 3175 ntBASIC17.87■□□□□ 0.45
C11orf88Q6PI97 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.87■□□□□ 0.45
C11orf88Q6PI97 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
C11orf88Q6PI97 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms