Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 LSM12P1-201ENST00000411836 588 ntBASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 CYP2T3P-201ENST00000601990 817 ntBASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.1■■□□□ 1.29
SWSAP1Q6NVH7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 MCRIP2P1-201ENST00000394346 511 ntBASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SWSAP1Q6NVH7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 DUSP5P2-201ENST00000426873 1033 ntBASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 AC097658.1-201ENST00000475555 843 ntBASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 AC091874.3-201ENST00000512672 1195 ntBASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
SWSAP1Q6NVH7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SWSAP1Q6NVH7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.08■■□□□ 1.28
SWSAP1Q6NVH7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
SWSAP1Q6NVH7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 MYC-209ENST00000641252 345 ntBASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 LINC00565-201ENST00000562710 2331 ntBASIC23.07■■□□□ 1.28
SWSAP1Q6NVH7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 AC083880.1-201ENST00000608266 535 ntBASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SWSAP1Q6NVH7 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.05■■□□□ 1.28
SWSAP1Q6NVH7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
SWSAP1Q6NVH7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SWSAP1Q6NVH7 KRT18P68-201ENST00000392293 1000 ntBASIC23.05■■□□□ 1.28
SWSAP1Q6NVH7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.05■■□□□ 1.28
SWSAP1Q6NVH7 AL024507.2-201ENST00000606070 2574 ntBASIC23.05■■□□□ 1.28
SWSAP1Q6NVH7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SWSAP1Q6NVH7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SWSAP1Q6NVH7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SWSAP1Q6NVH7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms