Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRK2Q5S007 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRK2Q5S007 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRK2Q5S007 NUDT16P1-203ENST00000513809 620 ntBASIC18.18■□□□□ 0.5
LRRK2Q5S007 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRK2Q5S007 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRK2Q5S007 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRK2Q5S007 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
LRRK2Q5S007 AC073195.1-201ENST00000607241 877 ntBASIC18.18■□□□□ 0.5
LRRK2Q5S007 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRK2Q5S007 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRK2Q5S007 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRK2Q5S007 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.18■□□□□ 0.5
LRRK2Q5S007 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRK2Q5S007 AC010947.1-201ENST00000623454 693 ntBASIC18.18■□□□□ 0.5
LRRK2Q5S007 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRK2Q5S007 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRRK2Q5S007 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRK2Q5S007 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRK2Q5S007 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRK2Q5S007 KRT18P48-201ENST00000434763 852 ntBASIC18.17■□□□□ 0.5
LRRK2Q5S007 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.17■□□□□ 0.5
LRRK2Q5S007 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
LRRK2Q5S007 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRK2Q5S007 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRK2Q5S007 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.17■□□□□ 0.5
LRRK2Q5S007 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRK2Q5S007 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
LRRK2Q5S007 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRK2Q5S007 AC087633.2-202ENST00000565166 1439 ntBASIC18.17■□□□□ 0.5
LRRK2Q5S007 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRK2Q5S007 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRK2Q5S007 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRK2Q5S007 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRK2Q5S007 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRK2Q5S007 AL031963.3-201ENST00000606441 850 ntBASIC18.16■□□□□ 0.5
LRRK2Q5S007 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRK2Q5S007 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
LRRK2Q5S007 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LRRK2Q5S007 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.16■□□□□ 0.5
LRRK2Q5S007 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRK2Q5S007 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRK2Q5S007 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.16■□□□□ 0.5
LRRK2Q5S007 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRK2Q5S007 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRK2Q5S007 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRK2Q5S007 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRK2Q5S007 AC009947.2-201ENST00000444014 672 ntBASIC18.15■□□□□ 0.5
LRRK2Q5S007 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.15■□□□□ 0.5
LRRK2Q5S007 AP000525.1-201ENST00000608286 694 ntBASIC18.15■□□□□ 0.5
LRRK2Q5S007 CYP2D8P-201ENST00000433633 1490 ntBASIC18.15■□□□□ 0.5
LRRK2Q5S007 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRK2Q5S007 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRK2Q5S007 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRK2Q5S007 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRK2Q5S007 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRK2Q5S007 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
LRRK2Q5S007 CDV3P1-201ENST00000471403 739 ntBASIC18.15■□□□□ 0.5
LRRK2Q5S007 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRK2Q5S007 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.15■□□□□ 0.5
LRRK2Q5S007 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 AC005829.2-201ENST00000571422 1056 ntBASIC18.14■□□□□ 0.49
LRRK2Q5S007 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRK2Q5S007 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LRRK2Q5S007 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRK2Q5S007 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRK2Q5S007 AC079598.2-202ENST00000546624 1451 ntBASIC18.14■□□□□ 0.49
LRRK2Q5S007 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRK2Q5S007 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRK2Q5S007 FAM197Y1-201ENST00000421178 764 ntBASIC18.13■□□□□ 0.49
LRRK2Q5S007 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRK2Q5S007 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRK2Q5S007 AC079089.2-201ENST00000531211 1277 ntBASIC18.13■□□□□ 0.49
LRRK2Q5S007 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRK2Q5S007 REXO1L10P-201ENST00000615707 1290 ntBASIC18.13■□□□□ 0.49
LRRK2Q5S007 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRK2Q5S007 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRK2Q5S007 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
LRRK2Q5S007 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.12■□□□□ 0.49
LRRK2Q5S007 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms