Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 AC012313.1-201ENST00000593393 3059 ntBASIC10.37□□□□□ -0.75
LINC01554Q52M75 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC01554Q52M75 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC01554Q52M75 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01554Q52M75 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01554Q52M75 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01554Q52M75 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LINC01554Q52M75 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LINC01554Q52M75 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
LINC01554Q52M75 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01554Q52M75 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 AC046158.3-201ENST00000624947 2558 ntBASIC10.36□□□□□ -0.75
LINC01554Q52M75 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LINC01554Q52M75 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01554Q52M75 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01554Q52M75 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 KRT18P10-201ENST00000388836 1287 ntBASIC10.35□□□□□ -0.75
LINC01554Q52M75 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 AC092296.2-201ENST00000589470 999 ntBASIC10.35□□□□□ -0.75
LINC01554Q52M75 AC007029.1-201ENST00000604183 313 ntBASIC10.35□□□□□ -0.75
LINC01554Q52M75 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01554Q52M75 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LINC01554Q52M75 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01554Q52M75 NEFHP1-201ENST00000412845 2629 ntBASIC10.34□□□□□ -0.75
LINC01554Q52M75 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01554Q52M75 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms