Protein–RNA interactions for Protein: Q01560

NPL3, Nucleolar protein 3, yeastyeast

Known RBP RIP-Chip data

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NPL3Q01560 ECM16YMR128W 3804 nt3.82□□□□□ -1.8
NPL3Q01560 CIN1YOR349W 3045 nt3.82□□□□□ -1.8
NPL3Q01560 VAC8YEL013W 1737 nt3.82□□□□□ -1.8
NPL3Q01560 YLR294CYLR294C 330 nt3.82□□□□□ -1.8 RIP-Chip
NPL3Q01560 AIM32YML050W 936 nt3.82□□□□□ -1.8
NPL3Q01560 YBR141W-AYBR141W-A 96 nt3.82□□□□□ -1.8
NPL3Q01560 YPR003CYPR003C 2265 nt3.82□□□□□ -1.8
NPL3Q01560 AIP1YMR092C 1848 nt3.81□□□□□ -1.8
NPL3Q01560 21S_rRNA21S_rRNA 3296 nt3.81□□□□□ -1.8
NPL3Q01560 YCR090CYCR090C 549 nt3.81□□□□□ -1.8
NPL3Q01560 AAD3YCR107W 1092 nt3.81□□□□□ -1.8
NPL3Q01560 YER091C-AYER091C-A 222 nt3.81□□□□□ -1.8
NPL3Q01560 RPS0AYGR214W 759 nt3.81□□□□□ -1.8
NPL3Q01560 YHL037CYHL037C 402 nt3.81□□□□□ -1.8
NPL3Q01560 BCD1YHR040W 1101 nt3.81□□□□□ -1.8
NPL3Q01560 MRPL38YKL170W 417 nt3.81□□□□□ -1.8 RIP-Chip
NPL3Q01560 BSC3YLR465C 309 nt3.81□□□□□ -1.8 RIP-Chip
NPL3Q01560 JJJ2YJL162C 1752 nt3.81□□□□□ -1.8
NPL3Q01560 PTA1YAL043C 2358 nt3.81□□□□□ -1.8
NPL3Q01560 ERG5YMR015C 1617 nt3.81□□□□□ -1.8
NPL3Q01560 YCK2YNL154C 1641 nt3.81□□□□□ -1.8
NPL3Q01560 TAF6YGL112C 1551 nt3.8□□□□□ -1.8
NPL3Q01560 JIP5YPR169W 1479 nt3.8□□□□□ -1.8
NPL3Q01560 SPE1YKL184W 1401 nt3.8□□□□□ -1.8
NPL3Q01560 MRH1YDR033W 963 nt3.8□□□□□ -1.8
NPL3Q01560 YGL042CYGL042C 306 nt3.8□□□□□ -1.8
NPL3Q01560 RMP1YLR145W 606 nt3.8□□□□□ -1.8
NPL3Q01560 SPT23YKL020C 3249 nt3.8□□□□□ -1.8
NPL3Q01560 HFM1YGL251C 3564 nt3.79□□□□□ -1.8
NPL3Q01560 LCB4YOR171C 1875 nt3.79□□□□□ -1.8
NPL3Q01560 GCN4YEL009C 846 nt3.79□□□□□ -1.8 RIP-Chip
NPL3Q01560 MRPL31YKL138C 396 nt3.79□□□□□ -1.8 RIP-Chip
NPL3Q01560 OST6YML019W 999 nt3.79□□□□□ -1.8
NPL3Q01560 ASC1YMR116C 960 nt3.79□□□□□ -1.8
NPL3Q01560 COX7YMR256C 183 nt3.79□□□□□ -1.8 RIP-Chip
NPL3Q01560 YOL134CYOL134C 390 nt3.79□□□□□ -1.8
NPL3Q01560 PEX11YOL147C 711 nt3.79□□□□□ -1.8
NPL3Q01560 SEC15YGL233W 2733 nt3.79□□□□□ -1.8
NPL3Q01560 CHD1YER164W 4407 nt3.79□□□□□ -1.8
NPL3Q01560 snR65snR65 100 nt3.78□□□□□ -1.8
NPL3Q01560 NHP2YDL208W 471 nt3.78□□□□□ -1.8 RIP-Chip
NPL3Q01560 YEL057CYEL057C 702 nt3.78□□□□□ -1.8
NPL3Q01560 RPS26BYER131W 360 nt3.78□□□□□ -1.8 RIP-Chip
NPL3Q01560 NSL1YPL233W 651 nt3.78□□□□□ -1.8 RIP-Chip
NPL3Q01560 NCR1YPL006W 3513 nt3.78□□□□□ -1.8
NPL3Q01560 EMP70YLR083C 2004 nt3.78□□□□□ -1.8
NPL3Q01560 YJR098CYJR098C 1971 nt3.78□□□□□ -1.8
NPL3Q01560 STP2YHR006W 1626 nt3.77□□□□□ -1.81
NPL3Q01560 KHA1YJL094C 2622 nt3.77□□□□□ -1.81
NPL3Q01560 KRI1YNL308C 1776 nt3.77□□□□□ -1.81
NPL3Q01560 RPO21YDL140C 5202 nt3.77□□□□□ -1.81
NPL3Q01560 tC(GCA)BtC(GCA)B 72 nt3.77□□□□□ -1.81
NPL3Q01560 tC(GCA)GtC(GCA)G 72 nt3.77□□□□□ -1.81
NPL3Q01560 tC(GCA)P1tC(GCA)P1 72 nt3.77□□□□□ -1.81
NPL3Q01560 tC(GCA)P2tC(GCA)P2 72 nt3.77□□□□□ -1.81
NPL3Q01560 YGR025WYGR025W 303 nt3.77□□□□□ -1.81 RIP-Chip
NPL3Q01560 CRG1YHR209W 876 nt3.77□□□□□ -1.81
NPL3Q01560 AIM26YKL037W 357 nt3.77□□□□□ -1.81
NPL3Q01560 HHF2YNL030W 312 nt3.77□□□□□ -1.81
NPL3Q01560 URB2YJR041C 3525 nt3.77□□□□□ -1.81
NPL3Q01560 YBR012W-AYBR012W-A 1323 nt3.76□□□□□ -1.81
NPL3Q01560 YOR142W-AYOR142W-A 1323 nt3.76□□□□□ -1.81
NPL3Q01560 YPR158W-AYPR158W-A 1323 nt3.76□□□□□ -1.81
NPL3Q01560 SRC1YML034W 2505 nt3.76□□□□□ -1.81
NPL3Q01560 RPS13YDR064W 456 nt3.76□□□□□ -1.81
NPL3Q01560 YDR413CYDR413C 576 nt3.76□□□□□ -1.81
NPL3Q01560 IES6YEL044W 501 nt3.76□□□□□ -1.81 RIP-Chip
NPL3Q01560 TCD1YHR003C 1290 nt3.76□□□□□ -1.81
NPL3Q01560 NBL1YHR199C-A 222 nt3.76□□□□□ -1.81 RIP-Chip
NPL3Q01560 SRL3YKR091W 741 nt3.76□□□□□ -1.81 RIP-Chip
NPL3Q01560 YLR269CYLR269C 351 nt3.76□□□□□ -1.81
NPL3Q01560 JLP2YMR132C 627 nt3.76□□□□□ -1.81
NPL3Q01560 GYL1YMR192W 2163 nt3.76□□□□□ -1.81
NPL3Q01560 MSD1YPL104W 1977 nt3.76□□□□□ -1.81
NPL3Q01560 SLP1YOR154W 1764 nt3.76□□□□□ -1.81
NPL3Q01560 SWT1YOR166C 1377 nt3.76□□□□□ -1.81
NPL3Q01560 MLH2YLR035C 2088 nt3.75□□□□□ -1.81
NPL3Q01560 ABP140YOR239W 1887 nt3.75□□□□□ -1.81
NPL3Q01560 ATG26YLR189C 3597 nt3.75□□□□□ -1.81
NPL3Q01560 YGR035CYGR035C 351 nt3.75□□□□□ -1.81 RIP-Chip
NPL3Q01560 YNL179CYNL179C 438 nt3.75□□□□□ -1.81
NPL3Q01560 RSM19YNR037C 276 nt3.75□□□□□ -1.81 RIP-Chip
NPL3Q01560 YBR032WYBR032W 303 nt3.75□□□□□ -1.81
NPL3Q01560 MES1YGR264C 2256 nt3.75□□□□□ -1.81
NPL3Q01560 SRP72YPL210C 1923 nt3.75□□□□□ -1.81
NPL3Q01560 UTP13YLR222C 2454 nt3.75□□□□□ -1.81
NPL3Q01560 ALY1YKR021W 2748 nt3.74□□□□□ -1.81
NPL3Q01560 YGL007C-AYGL007C-A 87 nt3.74□□□□□ -1.81
NPL3Q01560 LSM1YJL124C 519 nt3.74□□□□□ -1.81 RIP-Chip
NPL3Q01560 YJL197C-AYJL197C-A 282 nt3.74□□□□□ -1.81
NPL3Q01560 YLR302CYLR302C 363 nt3.74□□□□□ -1.81
NPL3Q01560 NUP159YIL115C 4383 nt3.74□□□□□ -1.81
NPL3Q01560 RNR1YER070W 2667 nt3.74□□□□□ -1.81
NPL3Q01560 CHS3YBR023C 3498 nt3.74□□□□□ -1.81
NPL3Q01560 PHO81YGR233C 3537 nt3.73□□□□□ -1.81
NPL3Q01560 YCR081C-AYCR081C-A 237 nt3.73□□□□□ -1.81
NPL3Q01560 PHM6YDR281C 315 nt3.73□□□□□ -1.81 RIP-Chip
NPL3Q01560 YER038W-AYER038W-A 381 nt3.73□□□□□ -1.81
NPL3Q01560 YPS5YGL259W 498 nt3.73□□□□□ -1.81
NPL3Q01560 PDX1YGR193C 1233 nt3.73□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 18.2 ms