Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 YBR300CYBR300C 498 nt2.8□□□□□ -1.96
RPA49Q01080 GIN4YDR507C 3429 nt2.8□□□□□ -1.96
RPA49Q01080 POM152YMR129W 4014 nt2.8□□□□□ -1.96
RPA49Q01080 PRP8YHR165C 7242 nt2.79□□□□□ -1.96
RPA49Q01080 UTP15YMR093W 1542 nt2.79□□□□□ -1.96
RPA49Q01080 snR5snR5 204 nt2.79□□□□□ -1.96
RPA49Q01080 YER091C-AYER091C-A 222 nt2.79□□□□□ -1.96
RPA49Q01080 SNO3YFL060C 669 nt2.79□□□□□ -1.96
RPA49Q01080 YAL037WYAL037W 804 nt2.79□□□□□ -1.96
RPA49Q01080 MRP49YKL167C 414 nt2.79□□□□□ -1.96
RPA49Q01080 ATG38YLR211C 681 nt2.79□□□□□ -1.96
RPA49Q01080 YNL303WYNL303W 348 nt2.79□□□□□ -1.96
RPA49Q01080 SNO2YNL334C 669 nt2.79□□□□□ -1.96
RPA49Q01080 SRL4YPL033C 846 nt2.79□□□□□ -1.96
RPA49Q01080 snR191snR191 274 nt2.79□□□□□ -1.96
RPA49Q01080 TRM2YKR056W 1920 nt2.79□□□□□ -1.96
RPA49Q01080 NDT80YHR124W 1884 nt2.79□□□□□ -1.96
RPA49Q01080 15S_rRNA15S_rRNA 1649 nt2.79□□□□□ -1.96
RPA49Q01080 YCR090CYCR090C 549 nt2.78□□□□□ -1.96
RPA49Q01080 ERG28YER044C 447 nt2.78□□□□□ -1.96
RPA49Q01080 PRP21YJL203W 843 nt2.78□□□□□ -1.96
RPA49Q01080 SRP21YKL122C 504 nt2.78□□□□□ -1.96
RPA49Q01080 RPL20AYMR242C 519 nt2.78□□□□□ -1.96
RPA49Q01080 MIX23YBL107C 591 nt2.78□□□□□ -1.96
RPA49Q01080 PIS1YPR113W 663 nt2.78□□□□□ -1.96
RPA49Q01080 PTP3YER075C 2787 nt2.78□□□□□ -1.96
RPA49Q01080 RPN3YER021W 1572 nt2.78□□□□□ -1.96
RPA49Q01080 YRR1YOR162C 2433 nt2.78□□□□□ -1.97
RPA49Q01080 SLN1YIL147C 3663 nt2.78□□□□□ -1.97
RPA49Q01080 BUB1YGR188C 3066 nt2.77□□□□□ -1.97
RPA49Q01080 SPB1YCL054W 2526 nt2.77□□□□□ -1.97
RPA49Q01080 RSN1YMR266W 2862 nt2.77□□□□□ -1.97
RPA49Q01080 YPP1YGR198W 2454 nt2.77□□□□□ -1.97
RPA49Q01080 RIF1YBR275C 5751 nt2.77□□□□□ -1.97
RPA49Q01080 CCT7YJL111W 1653 nt2.77□□□□□ -1.97
RPA49Q01080 YDR461C-AYDR461C-A 243 nt2.77□□□□□ -1.97
RPA49Q01080 TDA2YER071C 381 nt2.77□□□□□ -1.97
RPA49Q01080 YJL086CYJL086C 369 nt2.77□□□□□ -1.97
RPA49Q01080 IRC21YMR073C 606 nt2.77□□□□□ -1.97
RPA49Q01080 YLR001CYLR001C 2589 nt2.77□□□□□ -1.97
RPA49Q01080 INP52YNL106C 3552 nt2.77□□□□□ -1.97
RPA49Q01080 FRE2YKL220C 2136 nt2.77□□□□□ -1.97
RPA49Q01080 SWC4YGR002C 1431 nt2.76□□□□□ -1.97
RPA49Q01080 FKS3YMR306W 5358 nt2.76□□□□□ -1.97
RPA49Q01080 snR70snR70 164 nt2.76□□□□□ -1.97
RPA49Q01080 TIM11YDR322C-A 291 nt2.76□□□□□ -1.97
RPA49Q01080 RCE1YMR274C 948 nt2.76□□□□□ -1.97
RPA49Q01080 YNR025CYNR025C 360 nt2.76□□□□□ -1.97
RPA49Q01080 YOL085W-AYOL085W-A 213 nt2.76□□□□□ -1.97
RPA49Q01080 RRG8YPR116W 834 nt2.76□□□□□ -1.97
RPA49Q01080 FUS1YCL027W 1539 nt2.76□□□□□ -1.97
RPA49Q01080 PDR1YGL013C 3207 nt2.76□□□□□ -1.97
RPA49Q01080 HAA1YPR008W 2085 nt2.75□□□□□ -1.97
RPA49Q01080 SIP3YNL257C 3690 nt2.75□□□□□ -1.97
RPA49Q01080 DBP7YKR024C 2229 nt2.75□□□□□ -1.97
RPA49Q01080 PDR3YBL005W 2931 nt2.75□□□□□ -1.97
RPA49Q01080 DYN2YDR424C 279 nt2.75□□□□□ -1.97
RPA49Q01080 PEX18YHR160C 852 nt2.75□□□□□ -1.97
RPA49Q01080 YNL235CYNL235C 432 nt2.75□□□□□ -1.97
RPA49Q01080 TAZ1YPR140W 1146 nt2.75□□□□□ -1.97
RPA49Q01080 YPR170CYPR170C 336 nt2.75□□□□□ -1.97
RPA49Q01080 APC2YLR127C 2562 nt2.75□□□□□ -1.97
RPA49Q01080 BFR1YOR198C 1413 nt2.75□□□□□ -1.97
RPA49Q01080 SIN3YOL004W 4611 nt2.75□□□□□ -1.97
RPA49Q01080 snR9snR9 187 nt2.74□□□□□ -1.97
RPA49Q01080 YHR032W-AYHR032W-A 180 nt2.74□□□□□ -1.97
RPA49Q01080 YHR054CYHR054C 1065 nt2.74□□□□□ -1.97
RPA49Q01080 YAP7YOL028C 738 nt2.74□□□□□ -1.97
RPA49Q01080 CSM4YPL200W 471 nt2.74□□□□□ -1.97
RPA49Q01080 YPR014CYPR014C 330 nt2.74□□□□□ -1.97
RPA49Q01080 DUG2YBR281C 2637 nt2.74□□□□□ -1.97
RPA49Q01080 UBX3YDL091C 1368 nt2.74□□□□□ -1.97
RPA49Q01080 VHR1YIL056W 1923 nt2.74□□□□□ -1.97
RPA49Q01080 PFF1YBR074W 2931 nt2.73□□□□□ -1.97
RPA49Q01080 YDL163WYDL163W 303 nt2.73□□□□□ -1.97
RPA49Q01080 HPA3YEL066W 540 nt2.73□□□□□ -1.97
RPA49Q01080 FAR7YFR008W 666 nt2.73□□□□□ -1.97
RPA49Q01080 YKL066WYKL066W 444 nt2.73□□□□□ -1.97
RPA49Q01080 NYV1YLR093C 762 nt2.73□□□□□ -1.97
RPA49Q01080 YLR230WYLR230W 306 nt2.73□□□□□ -1.97
RPA49Q01080 YNL150WYNL150W 408 nt2.73□□□□□ -1.97
RPA49Q01080 YPR147CYPR147C 915 nt2.73□□□□□ -1.97
RPA49Q01080 COG3YER157W 2406 nt2.73□□□□□ -1.97
RPA49Q01080 NEW1YPL226W 3591 nt2.72□□□□□ -1.97
RPA49Q01080 UBC5YDR059C 447 nt2.72□□□□□ -1.97
RPA49Q01080 YDR115WYDR115W 318 nt2.72□□□□□ -1.97
RPA49Q01080 TMA20YER007C-A 546 nt2.72□□□□□ -1.97
RPA49Q01080 PRE1YER012W 597 nt2.72□□□□□ -1.97
RPA49Q01080 RPS26BYER131W 360 nt2.72□□□□□ -1.97
RPA49Q01080 YMR31YFR049W 372 nt2.72□□□□□ -1.97
RPA49Q01080 YIL068W-AYIL068W-A 384 nt2.72□□□□□ -1.97
RPA49Q01080 REC102YLR329W 795 nt2.72□□□□□ -1.97
RPA49Q01080 YMR173W-AYMR173W-A 1185 nt2.72□□□□□ -1.97
RPA49Q01080 YMR254CYMR254C 309 nt2.72□□□□□ -1.97
RPA49Q01080 snR43snR43 209 nt2.72□□□□□ -1.97
RPA49Q01080 MFB1YDR219C 1398 nt2.72□□□□□ -1.97
RPA49Q01080 NPR1YNL183C 2373 nt2.72□□□□□ -1.97
RPA49Q01080 NCS2YNL119W 1482 nt2.71□□□□□ -1.97
RPA49Q01080 MMS1YPR164W 4224 nt2.71□□□□□ -1.98
RPA49Q01080 CTF13YMR094W 1437 nt2.71□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 44 ms