Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
H3F3AP84243 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H3F3AP84243 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H3F3AP84243 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
H3F3AP84243 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.5■□□□□ 0.55
H3F3AP84243 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.5■□□□□ 0.55
H3F3AP84243 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H3F3AP84243 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
H3F3AP84243 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.5■□□□□ 0.55
H3F3AP84243 AC231657.2-201ENST00000624556 255 ntBASIC18.5■□□□□ 0.55
H3F3AP84243 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.5■□□□□ 0.55
H3F3AP84243 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H3F3AP84243 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.5■□□□□ 0.55
H3F3AP84243 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
H3F3AP84243 AC116050.2-201ENST00000612102 1779 ntBASIC18.5■□□□□ 0.55
H3F3AP84243 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
H3F3AP84243 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.49■□□□□ 0.55
H3F3AP84243 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H3F3AP84243 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.49■□□□□ 0.55
H3F3AP84243 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
H3F3AP84243 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
H3F3AP84243 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H3F3AP84243 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.49■□□□□ 0.55
H3F3AP84243 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
H3F3AP84243 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.49■□□□□ 0.55
H3F3AP84243 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.49■□□□□ 0.55
H3F3AP84243 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.49■□□□□ 0.55
H3F3AP84243 AL591742.1-201ENST00000604433 565 ntBASIC18.49■□□□□ 0.55
H3F3AP84243 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
H3F3AP84243 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.49■□□□□ 0.55
H3F3AP84243 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
H3F3AP84243 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
H3F3AP84243 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
H3F3AP84243 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
H3F3AP84243 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.48■□□□□ 0.55
H3F3AP84243 CDCA4P2-201ENST00000441182 718 ntBASIC18.48■□□□□ 0.55
H3F3AP84243 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.48■□□□□ 0.55
H3F3AP84243 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.48■□□□□ 0.55
H3F3AP84243 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 RAP2CP1-201ENST00000605103 478 ntBASIC18.48■□□□□ 0.55
H3F3AP84243 AC073111.5-205ENST00000641717 521 ntBASIC18.48■□□□□ 0.55
H3F3AP84243 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 AC121338.2-201ENST00000622535 1744 ntBASIC18.48■□□□□ 0.55
H3F3AP84243 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.48■□□□□ 0.55
H3F3AP84243 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
H3F3AP84243 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H3F3AP84243 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
H3F3AP84243 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
H3F3AP84243 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
H3F3AP84243 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.47■□□□□ 0.55
H3F3AP84243 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.47■□□□□ 0.55
H3F3AP84243 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.47■□□□□ 0.55
H3F3AP84243 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.47■□□□□ 0.55
H3F3AP84243 PLK5-205ENST00000642079 1969 ntBASIC18.47■□□□□ 0.55
H3F3AP84243 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.47■□□□□ 0.55
H3F3AP84243 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 AC068338.2-201ENST00000563278 1430 ntBASIC18.47■□□□□ 0.55
H3F3AP84243 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.47■□□□□ 0.55
H3F3AP84243 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H3F3AP84243 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.46■□□□□ 0.55
H3F3AP84243 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.46■□□□□ 0.55
H3F3AP84243 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.46■□□□□ 0.55
H3F3AP84243 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.46■□□□□ 0.55
H3F3AP84243 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.46■□□□□ 0.55
H3F3AP84243 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
H3F3AP84243 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.46■□□□□ 0.55
H3F3AP84243 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
H3F3AP84243 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.46■□□□□ 0.55
H3F3AP84243 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
H3F3AP84243 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
H3F3AP84243 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
H3F3AP84243 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms