Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SKP1P63208 AC116050.2-201ENST00000612102 1779 ntBASIC19.64■□□□□ 0.73
SKP1P63208 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SKP1P63208 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SKP1P63208 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.64■□□□□ 0.73
SKP1P63208 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.64■□□□□ 0.73
SKP1P63208 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SKP1P63208 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.63■□□□□ 0.73
SKP1P63208 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SKP1P63208 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 AC091799.1-201ENST00000422823 811 ntBASIC19.63■□□□□ 0.73
SKP1P63208 AC007322.3-201ENST00000426526 701 ntBASIC19.63■□□□□ 0.73
SKP1P63208 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SKP1P63208 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SKP1P63208 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.62■□□□□ 0.73
SKP1P63208 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.62■□□□□ 0.73
SKP1P63208 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.62■□□□□ 0.73
SKP1P63208 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SKP1P63208 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.62■□□□□ 0.73
SKP1P63208 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.62■□□□□ 0.73
SKP1P63208 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 FAM21FP-204ENST00000608637 956 ntBASIC19.62■□□□□ 0.73
SKP1P63208 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SKP1P63208 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
SKP1P63208 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
SKP1P63208 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SKP1P63208 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SKP1P63208 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SKP1P63208 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SKP1P63208 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.61■□□□□ 0.73
SKP1P63208 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SKP1P63208 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.61■□□□□ 0.73
SKP1P63208 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SKP1P63208 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SKP1P63208 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SKP1P63208 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SKP1P63208 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.61■□□□□ 0.73
SKP1P63208 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SKP1P63208 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.61■□□□□ 0.73
SKP1P63208 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.61■□□□□ 0.73
SKP1P63208 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.61■□□□□ 0.73
SKP1P63208 AL049796.1-201ENST00000565336 1766 ntBASIC19.61■□□□□ 0.73
SKP1P63208 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SKP1P63208 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SKP1P63208 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
SKP1P63208 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SKP1P63208 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SKP1P63208 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SKP1P63208 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.6■□□□□ 0.73
SKP1P63208 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SKP1P63208 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SKP1P63208 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SKP1P63208 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SKP1P63208 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SKP1P63208 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SKP1P63208 MIR663A-201ENST00000385250 93 ntBASIC19.6■□□□□ 0.73
SKP1P63208 CYP2T1P-201ENST00000432607 1285 ntBASIC19.6■□□□□ 0.73
SKP1P63208 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.6■□□□□ 0.73
SKP1P63208 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.6■□□□□ 0.73
SKP1P63208 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.6■□□□□ 0.73
SKP1P63208 RAP2CP1-201ENST00000605103 478 ntBASIC19.6■□□□□ 0.73
SKP1P63208 OR10C1-204ENST00000622521 1039 ntBASIC19.6■□□□□ 0.73
SKP1P63208 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SKP1P63208 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SKP1P63208 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SKP1P63208 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SKP1P63208 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.6■□□□□ 0.73
SKP1P63208 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SKP1P63208 AC068338.2-201ENST00000563278 1430 ntBASIC19.59■□□□□ 0.73
SKP1P63208 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.59■□□□□ 0.73
SKP1P63208 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SKP1P63208 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SKP1P63208 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.59■□□□□ 0.73
SKP1P63208 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SKP1P63208 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SKP1P63208 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.59■□□□□ 0.73
SKP1P63208 AC090192.1-201ENST00000517740 490 ntBASIC19.59■□□□□ 0.73
SKP1P63208 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.59■□□□□ 0.73
SKP1P63208 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms