Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDC42P60953 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDC42P60953 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC42P60953 AL162377.1-201ENST00000618844 1793 ntBASIC18.87■□□□□ 0.61
CDC42P60953 FP700111.2-201ENST00000619190 1892 ntBASIC18.87■□□□□ 0.61
CDC42P60953 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC42P60953 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CDC42P60953 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC42P60953 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDC42P60953 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDC42P60953 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.86■□□□□ 0.61
CDC42P60953 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 AL512408.1-201ENST00000569378 2000 ntBASIC18.86■□□□□ 0.61
CDC42P60953 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.86■□□□□ 0.61
CDC42P60953 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.86■□□□□ 0.61
CDC42P60953 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.86■□□□□ 0.61
CDC42P60953 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CDC42P60953 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDC42P60953 AC112907.3-201ENST00000577781 2400 ntBASIC18.85■□□□□ 0.61
CDC42P60953 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC42P60953 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC42P60953 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC42P60953 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC42P60953 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.85■□□□□ 0.61
CDC42P60953 AL138724.1-201ENST00000606771 1088 ntBASIC18.85■□□□□ 0.61
CDC42P60953 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 AC138932.1-201ENST00000534164 6830 ntBASIC18.85■□□□□ 0.61
CDC42P60953 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CDC42P60953 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDC42P60953 AIRN-201ENST00000601203 4374 ntBASIC18.84■□□□□ 0.61
CDC42P60953 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.84■□□□□ 0.61
CDC42P60953 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDC42P60953 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.84■□□□□ 0.61
CDC42P60953 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.84■□□□□ 0.61
CDC42P60953 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.84■□□□□ 0.61
CDC42P60953 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDC42P60953 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.84■□□□□ 0.61
CDC42P60953 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.83■□□□□ 0.61
CDC42P60953 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42P60953 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42P60953 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42P60953 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CDC42P60953 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDC42P60953 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42P60953 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42P60953 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.83■□□□□ 0.6
CDC42P60953 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42P60953 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42P60953 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDC42P60953 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.6
CDC42P60953 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CDC42P60953 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42P60953 AC099778.1-201ENST00000568593 1911 ntBASIC18.82■□□□□ 0.6
CDC42P60953 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.82■□□□□ 0.6
CDC42P60953 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42P60953 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.82■□□□□ 0.6
CDC42P60953 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.82■□□□□ 0.6
CDC42P60953 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDC42P60953 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms