Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN2P57739 KRT18P68-201ENST00000392293 1000 ntBASIC20.47■□□□□ 0.87
CLDN2P57739 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.47■□□□□ 0.87
CLDN2P57739 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.47■□□□□ 0.87
CLDN2P57739 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.47■□□□□ 0.87
CLDN2P57739 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.47■□□□□ 0.87
CLDN2P57739 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.47■□□□□ 0.87
CLDN2P57739 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN2P57739 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.47■□□□□ 0.87
CLDN2P57739 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN2P57739 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN2P57739 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN2P57739 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLDN2P57739 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN2P57739 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CLDN2P57739 AL117328.2-201ENST00000624617 1940 ntBASIC20.47■□□□□ 0.87
CLDN2P57739 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN2P57739 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLDN2P57739 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CLDN2P57739 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.46■□□□□ 0.87
CLDN2P57739 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 PRORSD1P-201ENST00000295112 541 ntBASIC20.46■□□□□ 0.87
CLDN2P57739 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLDN2P57739 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.46■□□□□ 0.87
CLDN2P57739 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN2P57739 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN2P57739 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CLDN2P57739 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.46■□□□□ 0.87
CLDN2P57739 AL589743.5-201ENST00000616611 1050 ntBASIC20.46■□□□□ 0.87
CLDN2P57739 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.46■□□□□ 0.87
CLDN2P57739 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CLDN2P57739 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN2P57739 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN2P57739 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN2P57739 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN2P57739 AC116050.2-201ENST00000612102 1779 ntBASIC20.45■□□□□ 0.86
CLDN2P57739 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN2P57739 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN2P57739 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN2P57739 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN2P57739 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN2P57739 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN2P57739 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN2P57739 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CLDN2P57739 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CLDN2P57739 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN2P57739 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.45■□□□□ 0.86
CLDN2P57739 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 CYP21A1P-202ENST00000354927 1481 ntBASIC20.44■□□□□ 0.86
CLDN2P57739 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN2P57739 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.44■□□□□ 0.86
CLDN2P57739 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CLDN2P57739 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.44■□□□□ 0.86
CLDN2P57739 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLDN2P57739 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN2P57739 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.44■□□□□ 0.86
CLDN2P57739 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.44■□□□□ 0.86
CLDN2P57739 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLDN2P57739 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CLDN2P57739 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CLDN2P57739 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CLDN2P57739 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN2P57739 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.44■□□□□ 0.86
CLDN2P57739 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.44■□□□□ 0.86
CLDN2P57739 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN2P57739 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN2P57739 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN2P57739 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CLDN2P57739 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.43■□□□□ 0.86
CLDN2P57739 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.43■□□□□ 0.86
CLDN2P57739 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN2P57739 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN2P57739 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN2P57739 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN2P57739 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CLDN2P57739 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN2P57739 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.43■□□□□ 0.86
CLDN2P57739 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN2P57739 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN2P57739 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms