Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN17P56750 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDN17P56750 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN17P56750 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN17P56750 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDN17P56750 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.44■□□□□ 0.54
CLDN17P56750 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN17P56750 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN17P56750 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN17P56750 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN17P56750 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CLDN17P56750 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN17P56750 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN17P56750 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDN17P56750 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN17P56750 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.43■□□□□ 0.54
CLDN17P56750 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDN17P56750 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
CLDN17P56750 AC243732.1-201ENST00000612648 864 ntBASIC18.43■□□□□ 0.54
CLDN17P56750 AC010536.3-201ENST00000620306 533 ntBASIC18.43■□□□□ 0.54
CLDN17P56750 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN17P56750 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN17P56750 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN17P56750 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDN17P56750 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CLDN17P56750 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.43■□□□□ 0.54
CLDN17P56750 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CLDN17P56750 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN17P56750 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.42■□□□□ 0.54
CLDN17P56750 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDN17P56750 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.42■□□□□ 0.54
CLDN17P56750 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN17P56750 MFSD11-216ENST00000590393 1141 ntBASIC18.42■□□□□ 0.54
CLDN17P56750 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDN17P56750 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDN17P56750 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN17P56750 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDN17P56750 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN17P56750 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN17P56750 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLDN17P56750 TERF1P5-201ENST00000477545 1207 ntBASIC18.41■□□□□ 0.54
CLDN17P56750 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDN17P56750 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 IKBKGP1-201ENST00000612193 1073 ntBASIC18.41■□□□□ 0.54
CLDN17P56750 BID-214ENST00000617586 542 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDN17P56750 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLDN17P56750 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLDN17P56750 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDN17P56750 PLK5-205ENST00000642079 1969 ntBASIC18.41■□□□□ 0.54
CLDN17P56750 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN17P56750 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN17P56750 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
CLDN17P56750 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLDN17P56750 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDN17P56750 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.4■□□□□ 0.54
CLDN17P56750 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN17P56750 AC011767.1-201ENST00000617410 1153 ntBASIC18.4■□□□□ 0.54
CLDN17P56750 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLDN17P56750 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDN17P56750 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDN17P56750 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN17P56750 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN17P56750 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLDN17P56750 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.54
CLDN17P56750 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDN17P56750 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms