Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.82■■□□□ 1.24
PEX3P56589 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PEX3P56589 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PEX3P56589 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.82■■□□□ 1.24
PEX3P56589 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.82■■□□□ 1.24
PEX3P56589 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
PEX3P56589 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.82■■□□□ 1.24
PEX3P56589 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.82■■□□□ 1.24
PEX3P56589 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PEX3P56589 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PEX3P56589 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PEX3P56589 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
PEX3P56589 AC007322.3-201ENST00000426526 701 ntBASIC22.81■■□□□ 1.24
PEX3P56589 NCF1B-203ENST00000435988 1254 ntBASIC22.81■■□□□ 1.24
PEX3P56589 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.81■■□□□ 1.24
PEX3P56589 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.81■■□□□ 1.24
PEX3P56589 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.81■■□□□ 1.24
PEX3P56589 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PEX3P56589 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
PEX3P56589 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PEX3P56589 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PEX3P56589 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PEX3P56589 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.81■■□□□ 1.24
PEX3P56589 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PEX3P56589 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
PEX3P56589 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PEX3P56589 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PEX3P56589 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PEX3P56589 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.8■■□□□ 1.24
PEX3P56589 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.8■■□□□ 1.24
PEX3P56589 AC069236.1-201ENST00000604339 616 ntBASIC22.8■■□□□ 1.24
PEX3P56589 AC008694.1-202ENST00000636953 945 ntBASIC22.8■■□□□ 1.24
PEX3P56589 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
PEX3P56589 AL137060.1-201ENST00000618151 2648 ntBASIC22.8■■□□□ 1.24
PEX3P56589 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PEX3P56589 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PEX3P56589 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PEX3P56589 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PEX3P56589 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PEX3P56589 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PEX3P56589 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PEX3P56589 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PEX3P56589 METTL15-202ENST00000403099 795 ntTSL 5 BASIC22.79■■□□□ 1.24
PEX3P56589 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PEX3P56589 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PEX3P56589 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.79■■□□□ 1.24
PEX3P56589 AC083906.2-201ENST00000511578 360 ntBASIC22.79■■□□□ 1.24
PEX3P56589 RARRES2P4-201ENST00000514074 484 ntBASIC22.79■■□□□ 1.24
PEX3P56589 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PEX3P56589 AC133552.2-202ENST00000575694 574 ntBASIC22.79■■□□□ 1.24
PEX3P56589 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.79■■□□□ 1.24
PEX3P56589 FAM21FP-204ENST00000608637 956 ntBASIC22.79■■□□□ 1.24
PEX3P56589 AL121832.2-201ENST00000610979 668 ntBASIC22.79■■□□□ 1.24
PEX3P56589 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PEX3P56589 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PEX3P56589 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PEX3P56589 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PEX3P56589 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
PEX3P56589 AC093787.1-201ENST00000450396 207 ntBASIC22.78■■□□□ 1.24
PEX3P56589 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.78■■□□□ 1.24
PEX3P56589 AC105036.2-201ENST00000569468 176 ntBASIC22.78■■□□□ 1.24
PEX3P56589 OR10C1-204ENST00000622521 1039 ntBASIC22.78■■□□□ 1.24
PEX3P56589 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.78■■□□□ 1.24
PEX3P56589 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PEX3P56589 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.78■■□□□ 1.24
PEX3P56589 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PEX3P56589 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PEX3P56589 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.77■■□□□ 1.24
PEX3P56589 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
PEX3P56589 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PEX3P56589 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PEX3P56589 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
PEX3P56589 GPX1P1-201ENST00000388829 606 ntBASIC22.77■■□□□ 1.24
PEX3P56589 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.77■■□□□ 1.24
PEX3P56589 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PEX3P56589 VMO1-204ENST00000441199 741 ntTSL 2 BASIC22.77■■□□□ 1.24
PEX3P56589 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.77■■□□□ 1.24
PEX3P56589 AF201337.1-201ENST00000520239 748 ntBASIC22.77■■□□□ 1.24
PEX3P56589 OAS3-207ENST00000551007 998 ntTSL 2 BASIC22.77■■□□□ 1.24
PEX3P56589 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.77■■□□□ 1.24
PEX3P56589 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PEX3P56589 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PEX3P56589 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
PEX3P56589 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PEX3P56589 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PEX3P56589 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PEX3P56589 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.76■■□□□ 1.23
PEX3P56589 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PEX3P56589 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
PEX3P56589 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PEX3P56589 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PEX3P56589 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PEX3P56589 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PEX3P56589 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PEX3P56589 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.76■■□□□ 1.23
PEX3P56589 AC011484.1-201ENST00000377652 1995 ntBASIC22.76■■□□□ 1.23
PEX3P56589 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PEX3P56589 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.75■■□□□ 1.23
PEX3P56589 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PEX3P56589 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms