Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
CLTCL1P53675 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC29.87■■■□□ 2.37
CLTCL1P53675 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CLTCL1P53675 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CLTCL1P53675 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CLTCL1P53675 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CLTCL1P53675 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC29.87■■■□□ 2.37
CLTCL1P53675 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC29.87■■■□□ 2.37
CLTCL1P53675 GOLGA2P6-201ENST00000340929 2049 ntBASIC29.86■■■□□ 2.37
CLTCL1P53675 MFF-205ENST00000354503 1085 ntTSL 2 BASIC29.86■■■□□ 2.37
CLTCL1P53675 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
CLTCL1P53675 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC29.86■■■□□ 2.37
CLTCL1P53675 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CLTCL1P53675 AC008550.1-201ENST00000511500 884 ntBASIC29.86■■■□□ 2.37
CLTCL1P53675 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CLTCL1P53675 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
CLTCL1P53675 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
CLTCL1P53675 CRK-204ENST00000574295 1391 ntTSL 5 BASIC29.86■■■□□ 2.37
CLTCL1P53675 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CLTCL1P53675 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CLTCL1P53675 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CLTCL1P53675 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC29.86■■■□□ 2.37
CLTCL1P53675 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CLTCL1P53675 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CLTCL1P53675 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CLTCL1P53675 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC29.85■■■□□ 2.37
CLTCL1P53675 OR2A1-AS1-207ENST00000486094 819 ntBASIC29.85■■■□□ 2.37
CLTCL1P53675 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC29.85■■■□□ 2.37
CLTCL1P53675 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CLTCL1P53675 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CLTCL1P53675 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
CLTCL1P53675 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
CLTCL1P53675 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
CLTCL1P53675 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CLTCL1P53675 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CLTCL1P53675 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CLTCL1P53675 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
CLTCL1P53675 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CLTCL1P53675 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CLTCL1P53675 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CLTCL1P53675 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
CLTCL1P53675 BAALC-201ENST00000297574 801 ntTSL 3 BASIC29.84■■■□□ 2.37
CLTCL1P53675 HES2-205ENST00000487437 968 ntTSL 3 BASIC29.84■■■□□ 2.37
CLTCL1P53675 C1QBPP2-201ENST00000528754 825 ntBASIC29.84■■■□□ 2.37
CLTCL1P53675 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC29.84■■■□□ 2.37
CLTCL1P53675 MME-217ENST00000616757 1315 ntTSL 5 BASIC29.84■■■□□ 2.37
CLTCL1P53675 ECEL1P1-201ENST00000373592 1742 ntBASIC29.84■■■□□ 2.37
CLTCL1P53675 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC29.84■■■□□ 2.37
CLTCL1P53675 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CLTCL1P53675 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC29.84■■■□□ 2.37
CLTCL1P53675 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC29.84■■■□□ 2.37
CLTCL1P53675 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC29.84■■■□□ 2.37
CLTCL1P53675 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CLTCL1P53675 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CLTCL1P53675 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CLTCL1P53675 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC29.83■■■□□ 2.37
CLTCL1P53675 RPPH1-201ENST00000516869 333 ntBASIC29.83■■■□□ 2.37
CLTCL1P53675 AP006294.2-201ENST00000641667 209 ntBASIC29.83■■■□□ 2.37
CLTCL1P53675 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC29.83■■■□□ 2.37
CLTCL1P53675 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.83■■■□□ 2.37
CLTCL1P53675 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC29.83■■■□□ 2.37
CLTCL1P53675 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
CLTCL1P53675 POM121L13P-201ENST00000422362 380 ntBASIC29.82■■■□□ 2.36
CLTCL1P53675 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC29.82■■■□□ 2.36
CLTCL1P53675 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC29.82■■■□□ 2.36
CLTCL1P53675 AC233723.2-201ENST00000623798 2106 ntBASIC29.82■■■□□ 2.36
CLTCL1P53675 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CLTCL1P53675 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC29.82■■■□□ 2.36
CLTCL1P53675 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC29.82■■■□□ 2.36
CLTCL1P53675 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC29.82■■■□□ 2.36
CLTCL1P53675 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CLTCL1P53675 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
CLTCL1P53675 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC29.82■■■□□ 2.36
CLTCL1P53675 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC29.82■■■□□ 2.36
CLTCL1P53675 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC29.82■■■□□ 2.36
CLTCL1P53675 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
CLTCL1P53675 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
CLTCL1P53675 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC29.82■■■□□ 2.36
CLTCL1P53675 AL356652.1-201ENST00000615962 565 ntBASIC29.82■■■□□ 2.36
CLTCL1P53675 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC29.81■■■□□ 2.36
CLTCL1P53675 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC29.81■■■□□ 2.36
CLTCL1P53675 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC29.81■■■□□ 2.36
CLTCL1P53675 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC29.81■■■□□ 2.36
CLTCL1P53675 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
CLTCL1P53675 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC29.81■■■□□ 2.36
CLTCL1P53675 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC29.81■■■□□ 2.36
CLTCL1P53675 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CLTCL1P53675 RPS2P4-201ENST00000476944 856 ntBASIC29.81■■■□□ 2.36
CLTCL1P53675 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms