Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AL136116.3-201ENST00000402907 1138 ntBASIC18.9■□□□□ 0.62
HMGA2P52926 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HMGA2P52926 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGA2P52926 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGA2P52926 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMGA2P52926 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGA2P52926 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
HMGA2P52926 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMGA2P52926 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.9■□□□□ 0.62
HMGA2P52926 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
HMGA2P52926 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.89■□□□□ 0.62
HMGA2P52926 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.89■□□□□ 0.62
HMGA2P52926 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
HMGA2P52926 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGA2P52926 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGA2P52926 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGA2P52926 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGA2P52926 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGA2P52926 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGA2P52926 AL136162.1-201ENST00000607711 1078 ntBASIC18.89■□□□□ 0.61
HMGA2P52926 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
HMGA2P52926 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGA2P52926 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.89■□□□□ 0.61
HMGA2P52926 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGA2P52926 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMGA2P52926 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.89■□□□□ 0.61
HMGA2P52926 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMGA2P52926 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.88■□□□□ 0.61
HMGA2P52926 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGA2P52926 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGA2P52926 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGA2P52926 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGA2P52926 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HMGA2P52926 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGA2P52926 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HMGA2P52926 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGA2P52926 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HMGA2P52926 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMGA2P52926 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGA2P52926 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGA2P52926 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGA2P52926 AC092720.2-201ENST00000602388 1665 ntBASIC18.88■□□□□ 0.61
HMGA2P52926 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
HMGA2P52926 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGA2P52926 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMGA2P52926 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGA2P52926 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.88■□□□□ 0.61
HMGA2P52926 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
HMGA2P52926 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 MIR572-201ENST00000384983 95 ntBASIC18.87■□□□□ 0.61
HMGA2P52926 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGA2P52926 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGA2P52926 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.87■□□□□ 0.61
HMGA2P52926 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HMGA2P52926 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGA2P52926 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.87■□□□□ 0.61
HMGA2P52926 AC135279.3-201ENST00000610945 1311 ntBASIC18.87■□□□□ 0.61
HMGA2P52926 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.87■□□□□ 0.61
HMGA2P52926 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HMGA2P52926 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.87■□□□□ 0.61
HMGA2P52926 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.86■□□□□ 0.61
HMGA2P52926 TSPY26P-201ENST00000476365 1326 ntBASIC18.86■□□□□ 0.61
HMGA2P52926 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGA2P52926 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HMGA2P52926 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HMGA2P52926 AC008764.7-201ENST00000593779 1081 ntBASIC18.86■□□□□ 0.61
HMGA2P52926 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
HMGA2P52926 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 TCF3P1-201ENST00000423021 1937 ntBASIC18.86■□□□□ 0.61
HMGA2P52926 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HMGA2P52926 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGA2P52926 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HMGA2P52926 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.85■□□□□ 0.61
HMGA2P52926 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
HMGA2P52926 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
HMGA2P52926 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGA2P52926 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HMGA2P52926 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.85■□□□□ 0.61
HMGA2P52926 AC099791.1-201ENST00000416440 715 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms