Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AC016405.3-201ENST00000607710 860 ntBASIC20.01■□□□□ 0.79
RAB28P51157 OR10C1-204ENST00000622521 1039 ntBASIC20.01■□□□□ 0.79
RAB28P51157 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB28P51157 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB28P51157 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB28P51157 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB28P51157 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RAB28P51157 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RAB28P51157 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20■□□□□ 0.79
RAB28P51157 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RAB28P51157 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RAB28P51157 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20■□□□□ 0.79
RAB28P51157 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RAB28P51157 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20■□□□□ 0.79
RAB28P51157 AC007375.3-201ENST00000600936 2314 ntBASIC20■□□□□ 0.79
RAB28P51157 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20■□□□□ 0.79
RAB28P51157 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20■□□□□ 0.79
RAB28P51157 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RAB28P51157 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB28P51157 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB28P51157 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB28P51157 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB28P51157 AC011484.1-201ENST00000377652 1995 ntBASIC19.99■□□□□ 0.79
RAB28P51157 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RAB28P51157 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB28P51157 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB28P51157 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RAB28P51157 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB28P51157 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB28P51157 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB28P51157 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RAB28P51157 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.99■□□□□ 0.79
RAB28P51157 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB28P51157 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.99■□□□□ 0.79
RAB28P51157 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RAB28P51157 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB28P51157 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RAB28P51157 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RAB28P51157 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB28P51157 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RAB28P51157 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.99■□□□□ 0.79
RAB28P51157 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB28P51157 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
RAB28P51157 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB28P51157 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB28P51157 NCF1B-203ENST00000435988 1254 ntBASIC19.98■□□□□ 0.79
RAB28P51157 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB28P51157 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RAB28P51157 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RAB28P51157 AL121832.2-201ENST00000610979 668 ntBASIC19.98■□□□□ 0.79
RAB28P51157 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.98■□□□□ 0.79
RAB28P51157 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.98■□□□□ 0.79
RAB28P51157 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB28P51157 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB28P51157 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB28P51157 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RAB28P51157 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RAB28P51157 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB28P51157 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.97■□□□□ 0.79
RAB28P51157 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB28P51157 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB28P51157 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RAB28P51157 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RAB28P51157 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB28P51157 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB28P51157 AF201337.1-201ENST00000520239 748 ntBASIC19.97■□□□□ 0.79
RAB28P51157 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB28P51157 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB28P51157 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB28P51157 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB28P51157 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.97■□□□□ 0.79
RAB28P51157 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RAB28P51157 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB28P51157 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RAB28P51157 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
RAB28P51157 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB28P51157 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RAB28P51157 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB28P51157 AL512625.2-201ENST00000417533 625 ntBASIC19.96■□□□□ 0.79
RAB28P51157 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.96■□□□□ 0.79
RAB28P51157 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RAB28P51157 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
RAB28P51157 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.96■□□□□ 0.79
RAB28P51157 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.96■□□□□ 0.79
RAB28P51157 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB28P51157 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.96■□□□□ 0.79
RAB28P51157 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RAB28P51157 AC005229.4-201ENST00000610085 2198 ntBASIC19.95■□□□□ 0.78
RAB28P51157 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB28P51157 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB28P51157 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RAB28P51157 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB28P51157 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB28P51157 GPX1P1-201ENST00000388829 606 ntBASIC19.95■□□□□ 0.78
RAB28P51157 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.95■□□□□ 0.78
RAB28P51157 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.95■□□□□ 0.78
RAB28P51157 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RAB28P51157 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.95■□□□□ 0.78
RAB28P51157 AC083906.2-201ENST00000511578 360 ntBASIC19.95■□□□□ 0.78
RAB28P51157 AC105036.2-201ENST00000569468 176 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms