Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF144AP50876 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF144AP50876 AC138907.5-202ENST00000569484 235 ntBASIC19.17■□□□□ 0.66
RNF144AP50876 NTF6G-201ENST00000591094 616 ntBASIC19.17■□□□□ 0.66
RNF144AP50876 AC008175.2-201ENST00000612840 297 ntBASIC19.17■□□□□ 0.66
RNF144AP50876 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RNF144AP50876 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF144AP50876 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF144AP50876 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF144AP50876 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF144AP50876 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF144AP50876 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF144AP50876 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF144AP50876 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF144AP50876 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RNF144AP50876 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF144AP50876 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF144AP50876 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF144AP50876 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF144AP50876 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF144AP50876 MIR935-201ENST00000401179 91 ntBASIC19.15■□□□□ 0.66
RNF144AP50876 AC034268.1-201ENST00000441047 882 ntBASIC19.15■□□□□ 0.66
RNF144AP50876 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF144AP50876 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF144AP50876 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
RNF144AP50876 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RNF144AP50876 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RNF144AP50876 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.14■□□□□ 0.65
RNF144AP50876 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RNF144AP50876 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RNF144AP50876 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF144AP50876 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.14■□□□□ 0.65
RNF144AP50876 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RNF144AP50876 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF144AP50876 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF144AP50876 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RNF144AP50876 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF144AP50876 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.13■□□□□ 0.65
RNF144AP50876 KRT18P5-201ENST00000436075 1291 ntBASIC19.13■□□□□ 0.65
RNF144AP50876 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF144AP50876 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.13■□□□□ 0.65
RNF144AP50876 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF144AP50876 UBE2DNL-204ENST00000602536 740 ntBASIC19.13■□□□□ 0.65
RNF144AP50876 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RNF144AP50876 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
RNF144AP50876 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RNF144AP50876 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF144AP50876 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.13■□□□□ 0.65
RNF144AP50876 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RNF144AP50876 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF144AP50876 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RNF144AP50876 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RNF144AP50876 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms