Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC23.06■■□□□ 1.28
CPT1AP50416 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CPT1AP50416 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.06■■□□□ 1.28
CPT1AP50416 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CPT1AP50416 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.05■■□□□ 1.28
CPT1AP50416 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.05■■□□□ 1.28
CPT1AP50416 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPT1AP50416 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPT1AP50416 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPT1AP50416 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CPT1AP50416 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.05■■□□□ 1.28
CPT1AP50416 AC069544.1-201ENST00000609399 999 ntBASIC23.05■■□□□ 1.28
CPT1AP50416 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CPT1AP50416 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPT1AP50416 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CPT1AP50416 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CPT1AP50416 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC23.05■■□□□ 1.28
CPT1AP50416 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.05■■□□□ 1.28
CPT1AP50416 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.05■■□□□ 1.28
CPT1AP50416 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.05■■□□□ 1.28
CPT1AP50416 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CPT1AP50416 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPT1AP50416 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPT1AP50416 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CPT1AP50416 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPT1AP50416 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
CPT1AP50416 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CPT1AP50416 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.04■■□□□ 1.28
CPT1AP50416 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC23.04■■□□□ 1.28
CPT1AP50416 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CPT1AP50416 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPT1AP50416 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CPT1AP50416 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPT1AP50416 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.03■■□□□ 1.28
CPT1AP50416 C2orf69P4-201ENST00000565394 541 ntBASIC23.03■■□□□ 1.28
CPT1AP50416 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.03■■□□□ 1.28
CPT1AP50416 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.03■■□□□ 1.28
CPT1AP50416 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.03■■□□□ 1.28
CPT1AP50416 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CPT1AP50416 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC23.03■■□□□ 1.28
CPT1AP50416 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CPT1AP50416 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPT1AP50416 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPT1AP50416 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CPT1AP50416 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CPT1AP50416 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.03■■□□□ 1.28
CPT1AP50416 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CPT1AP50416 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.03■■□□□ 1.28
CPT1AP50416 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPT1AP50416 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPT1AP50416 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
CPT1AP50416 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPT1AP50416 AC087633.2-202ENST00000565166 1439 ntBASIC23.02■■□□□ 1.28
CPT1AP50416 POM121L13P-201ENST00000422362 380 ntBASIC23.02■■□□□ 1.28
CPT1AP50416 AC233263.1-201ENST00000578059 224 ntBASIC23.02■■□□□ 1.28
CPT1AP50416 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPT1AP50416 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CPT1AP50416 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPT1AP50416 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPT1AP50416 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CPT1AP50416 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
CPT1AP50416 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CPT1AP50416 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CPT1AP50416 AC242852.2-201ENST00000615738 1807 ntBASIC23.01■■□□□ 1.27
CPT1AP50416 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CPT1AP50416 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.01■■□□□ 1.27
CPT1AP50416 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC23.01■■□□□ 1.27
CPT1AP50416 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC23.01■■□□□ 1.27
CPT1AP50416 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
CPT1AP50416 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CPT1AP50416 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CPT1AP50416 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CPT1AP50416 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.01■■□□□ 1.27
CPT1AP50416 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC23■■□□□ 1.27
CPT1AP50416 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CPT1AP50416 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CPT1AP50416 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CPT1AP50416 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC23■■□□□ 1.27
CPT1AP50416 PGM5P4-201ENST00000421970 445 ntBASIC23■■□□□ 1.27
CPT1AP50416 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CPT1AP50416 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CPT1AP50416 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC23■■□□□ 1.27
CPT1AP50416 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.99■■□□□ 1.27
CPT1AP50416 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.99■■□□□ 1.27
CPT1AP50416 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPT1AP50416 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPT1AP50416 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
CPT1AP50416 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CPT1AP50416 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC22.99■■□□□ 1.27
CPT1AP50416 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
CPT1AP50416 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC22.99■■□□□ 1.27
CPT1AP50416 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.99■■□□□ 1.27
CPT1AP50416 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.99■■□□□ 1.27
CPT1AP50416 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPT1AP50416 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.99■■□□□ 1.27
CPT1AP50416 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CPT1AP50416 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.99■■□□□ 1.27
CPT1AP50416 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms