Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.52■□□□□ 0.71
CLK3P49761 AL049796.1-201ENST00000565336 1766 ntBASIC19.52■□□□□ 0.71
CLK3P49761 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLK3P49761 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLK3P49761 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLK3P49761 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLK3P49761 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CLK3P49761 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CLK3P49761 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLK3P49761 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLK3P49761 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.51■□□□□ 0.71
CLK3P49761 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.5■□□□□ 0.71
CLK3P49761 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLK3P49761 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CLK3P49761 AC097381.1-201ENST00000429019 1296 ntBASIC19.5■□□□□ 0.71
CLK3P49761 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.5■□□□□ 0.71
CLK3P49761 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.5■□□□□ 0.71
CLK3P49761 KRT18P14-201ENST00000534205 1250 ntBASIC19.5■□□□□ 0.71
CLK3P49761 MIR6821-201ENST00000617625 74 ntBASIC19.5■□□□□ 0.71
CLK3P49761 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.5■□□□□ 0.71
CLK3P49761 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLK3P49761 AC007952.6-201ENST00000573168 2673 ntBASIC19.5■□□□□ 0.71
CLK3P49761 AC003957.1-201ENST00000625108 2673 ntBASIC19.5■□□□□ 0.71
CLK3P49761 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLK3P49761 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLK3P49761 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
CLK3P49761 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.5■□□□□ 0.71
CLK3P49761 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLK3P49761 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.49■□□□□ 0.71
CLK3P49761 TERF1P2-201ENST00000583350 1212 ntBASIC19.49■□□□□ 0.71
CLK3P49761 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.49■□□□□ 0.71
CLK3P49761 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CLK3P49761 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLK3P49761 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLK3P49761 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CLK3P49761 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
CLK3P49761 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.49■□□□□ 0.71
CLK3P49761 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CLK3P49761 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.49■□□□□ 0.71
CLK3P49761 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.49■□□□□ 0.71
CLK3P49761 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLK3P49761 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLK3P49761 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLK3P49761 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.48■□□□□ 0.71
CLK3P49761 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLK3P49761 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.48■□□□□ 0.71
CLK3P49761 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.48■□□□□ 0.71
CLK3P49761 CCDC92B-201ENST00000575506 885 ntBASIC19.48■□□□□ 0.71
CLK3P49761 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.48■□□□□ 0.71
CLK3P49761 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLK3P49761 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLK3P49761 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLK3P49761 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
CLK3P49761 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLK3P49761 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLK3P49761 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.48■□□□□ 0.71
CLK3P49761 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.47■□□□□ 0.71
CLK3P49761 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.47■□□□□ 0.71
CLK3P49761 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLK3P49761 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 AC034268.1-201ENST00000441047 882 ntBASIC19.47■□□□□ 0.71
CLK3P49761 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 RARRES2P6-201ENST00000567333 442 ntBASIC19.47■□□□□ 0.71
CLK3P49761 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLK3P49761 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.47■□□□□ 0.71
CLK3P49761 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 KRT87P-202ENST00000534226 1464 ntBASIC19.47■□□□□ 0.71
CLK3P49761 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLK3P49761 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.46■□□□□ 0.71
CLK3P49761 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLK3P49761 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.46■□□□□ 0.71
CLK3P49761 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms