Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.73■□□□□ 0.43
CBX5P45973 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.73■□□□□ 0.43
CBX5P45973 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
CBX5P45973 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.73■□□□□ 0.43
CBX5P45973 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.73■□□□□ 0.43
CBX5P45973 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.73■□□□□ 0.43
CBX5P45973 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CBX5P45973 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CBX5P45973 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.72■□□□□ 0.43
CBX5P45973 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.72■□□□□ 0.43
CBX5P45973 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CBX5P45973 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.71■□□□□ 0.43
CBX5P45973 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CBX5P45973 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CBX5P45973 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX5P45973 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.71■□□□□ 0.43
CBX5P45973 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.71■□□□□ 0.43
CBX5P45973 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CBX5P45973 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CBX5P45973 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CBX5P45973 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CBX5P45973 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CBX5P45973 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX5P45973 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CBX5P45973 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CBX5P45973 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.7■□□□□ 0.42
CBX5P45973 AP006587.3-201ENST00000525742 1516 ntBASIC17.7■□□□□ 0.42
CBX5P45973 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.7■□□□□ 0.42
CBX5P45973 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CBX5P45973 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CBX5P45973 AC090340.1-201ENST00000620778 4980 ntBASIC17.7■□□□□ 0.42
CBX5P45973 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.69■□□□□ 0.42
CBX5P45973 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX5P45973 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.69■□□□□ 0.42
CBX5P45973 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CBX5P45973 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms