Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.47■■□□□ 1.03
MMP13P45452 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.47■■□□□ 1.03
MMP13P45452 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.47■■□□□ 1.03
MMP13P45452 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.47■■□□□ 1.03
MMP13P45452 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.47■■□□□ 1.03
MMP13P45452 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.47■■□□□ 1.03
MMP13P45452 AC104187.1-201ENST00000607510 612 ntBASIC21.47■■□□□ 1.03
MMP13P45452 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.47■■□□□ 1.03
MMP13P45452 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
MMP13P45452 GABARAPL3-202ENST00000624044 1851 ntBASIC21.47■■□□□ 1.03
MMP13P45452 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
MMP13P45452 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
MMP13P45452 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MMP13P45452 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
MMP13P45452 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
MMP13P45452 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP13P45452 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.46■■□□□ 1.03
MMP13P45452 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP13P45452 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP13P45452 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
MMP13P45452 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.46■■□□□ 1.03
MMP13P45452 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
MMP13P45452 MIR5787-201ENST00000611784 55 ntBASIC21.46■■□□□ 1.03
MMP13P45452 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.46■■□□□ 1.03
MMP13P45452 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.46■■□□□ 1.03
MMP13P45452 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
MMP13P45452 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.46■■□□□ 1.03
MMP13P45452 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.46■■□□□ 1.03
MMP13P45452 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP13P45452 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MMP13P45452 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MMP13P45452 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.45■■□□□ 1.03
MMP13P45452 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
MMP13P45452 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
MMP13P45452 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.45■■□□□ 1.02
MMP13P45452 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
MMP13P45452 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP13P45452 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
MMP13P45452 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP13P45452 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.45■■□□□ 1.02
MMP13P45452 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.45■■□□□ 1.02
MMP13P45452 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP13P45452 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP13P45452 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP13P45452 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.45■■□□□ 1.02
MMP13P45452 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP13P45452 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.45■■□□□ 1.02
MMP13P45452 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.45■■□□□ 1.02
MMP13P45452 KRT18P61-201ENST00000585825 1298 ntBASIC21.45■■□□□ 1.02
MMP13P45452 NTF6G-201ENST00000591094 616 ntBASIC21.45■■□□□ 1.02
MMP13P45452 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP13P45452 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
MMP13P45452 AP005212.1-201ENST00000581547 1997 ntBASIC21.45■■□□□ 1.02
MMP13P45452 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MMP13P45452 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP13P45452 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP13P45452 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
MMP13P45452 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP13P45452 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.44■■□□□ 1.02
MMP13P45452 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP13P45452 AC138907.5-202ENST00000569484 235 ntBASIC21.44■■□□□ 1.02
MMP13P45452 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
MMP13P45452 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP13P45452 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
MMP13P45452 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP13P45452 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
MMP13P45452 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.44■■□□□ 1.02
MMP13P45452 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.44■■□□□ 1.02
MMP13P45452 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.44■■□□□ 1.02
MMP13P45452 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.43■■□□□ 1.02
MMP13P45452 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP13P45452 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
MMP13P45452 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.43■■□□□ 1.02
MMP13P45452 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.43■■□□□ 1.02
MMP13P45452 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP13P45452 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP13P45452 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
MMP13P45452 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
MMP13P45452 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP13P45452 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP13P45452 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
MMP13P45452 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
MMP13P45452 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.42■■□□□ 1.02
MMP13P45452 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.42■■□□□ 1.02
MMP13P45452 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
MMP13P45452 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MMP13P45452 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
MMP13P45452 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
MMP13P45452 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.42■■□□□ 1.02
MMP13P45452 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
MMP13P45452 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
MMP13P45452 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.41■■□□□ 1.02
MMP13P45452 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms